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PLM2_5_b1_sep16_scaffold_547_19

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 21836..22315

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 Tax=Patulibacter americanus RepID=UPI0003B5C1FE similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 165.0
  • Bit_score: 169
  • Evalue 1.90e-39
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 166.0
  • Bit_score: 161
  • Evalue 1.50e-37
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 157.0
  • Bit_score: 233
  • Evalue 2.00e-58

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGCTCCCCGCCGAGCTCGAGGCTTTCGCGCTCGAACACGACCTCGCCGACGACGAGGTCGAGCTGCTGACGCGTGAGCTCGAGACCACCGGTCTCGAGGTACGTGAGCCTGCCGAAGAGCCGGAGCCGGAGAAGCCTGCGGCGCCCGAGCCCGTCGCCGCGCAGGCGCAGGCGATGGTCGGCGCCGCCGACAGCCTGCAGCTCTTCCTCGCCGACATCGGCAGGCACAAGCTGCTGACCGCGGCCGAGGAGGTCATGCTCGCGAAGGGGATCGAGCGCGGCGACCTGACGGCCAAGCGCCGGATGATCGAGTCGAACCTGCGCCTCGTGGTCTCGATCGCGAAGGGCTACCGCGGACTGGGCGTCCCGTTCCTGGACCTGATCCAGGAGGGCACGCTCGGGCTCAACCGCGCGGTCGAGAAGTTCGACTGGCGGCGCGGCTACAAGTTCTCGACGTACGCGACCTGGTGGATCCGCCAG
PROTEIN sequence
Length: 160
VLPAELEAFALEHDLADDEVELLTRELETTGLEVREPAEEPEPEKPAAPEPVAAQAQAMVGAADSLQLFLADIGRHKLLTAAEEVMLAKGIERGDLTAKRRMIESNLRLVVSIAKGYRGLGVPFLDLIQEGTLGLNRAVEKFDWRRGYKFSTYATWWIRQ