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PLM2_5_b1_sep16_scaffold_2313_11

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(10683..11225)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein / SSU ribosomal protein S30P Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVJ5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 187.0
  • Bit_score: 184
  • Evalue 6.50e-44
sigma 54 modulation protein/30S ribosomal protein S30P similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 187.0
  • Bit_score: 184
  • Evalue 1.90e-44
Tax=RBG_16_Actinobacteria_64_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 187.0
  • Bit_score: 193
  • Evalue 1.50e-46

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Taxonomy

RBG_16_Actinobacteria_64_13_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCAGTTCCAGGTGAAGGGCAGGAACCTCGAGGTCAGCGACGCGATCCGCAGCTATGCCGAGGAAAAGCTCGGCAAGCTCGAGCGGCAGCTGACGGACCCGCGCGTGGAGCTCGAGCTGACCGTCGAGAAGAATCCCTCGATCGCAGAGAACCAGGTCGCCGAGGCCACGATCTGGACGGACGGCCCCGTGCTGCGAGCCCGCGAGTCGTCCTCCGACATGCGGGCCTCCATCGACCAGCTCGTGGAAAAGCTCGAGCGTCAGGTGAAGCGGTACCGGACGCGCGGCCGCTCACGTCGCCGCCGGGCCGCCCGCGCCAACGGGACGACGGCTCAAGCGACCCCGATCACCGCCGACGAGGCGGAGCCGCGGATCGTCAAGACCAAGCAGTTCGCAGTCACTCCGATGACGCCCGAAGAGGCAGTTCTCCAGCTCGAGCTGATCGGGCACGACTTCTTCGTCTTCCGCAGCGCCGACTCGGACGTCGTCAGCGTCGTCTACCGCCGCCGCGACGGCGAGTACGGGCTGATCGAGCCCCAGTGA
PROTEIN sequence
Length: 181
MQFQVKGRNLEVSDAIRSYAEEKLGKLERQLTDPRVELELTVEKNPSIAENQVAEATIWTDGPVLRARESSSDMRASIDQLVEKLERQVKRYRTRGRSRRRRAARANGTTAQATPITADEAEPRIVKTKQFAVTPMTPEEAVLQLELIGHDFFVFRSADSDVVSVVYRRRDGEYGLIEPQ*