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PLM2_5_b1_sep16_scaffold_5096_2

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 559..1038

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector, Hcp1 family Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIH3_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 160.0
  • Bit_score: 166
  • Evalue 1.60e-38
type VI secretion system effector similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 160.0
  • Bit_score: 166
  • Evalue 4.60e-39
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:ACK51292.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 160.0
  • Bit_score: 166
  • Evalue 2.30e-38

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
TTGGCGGACTTGTTCCTCAAGATCGACGGGATCCCGGGCGAGAGCCTGGACAACAAGCACAAGGACGAGATCGAGCTGGTGGCGTTTGGCTGGGGCGTGTCGAGCCAGGTCGCGGAGGGCCACGCAGGGGGCGGAGCCGGAGCCGGCCGCGCGCATTTCCAGGACTTCCACTTTACGACGCGCGTGAACAAGGCCTCGCCGCAGCTCTTCCTCGCAGTCGCCAGCGGCAAGCACATCAAGGAAGCGAGCCTGAGCGTCCGTCGCGCCGGGAAGCAGCAGCTCGAGTACCTGAAGATCAAGTTCAGCGATGTGCTCGTGACGTCGTTCCAGGAGGGGGGCGCCGACGGCACTGTCCCCGAGGAGACGATCGGGTTCGCCTTCTCCCGGATCCAGCTGGAGTACAGCCCGCAGGGGCCACGCGGCAGCGCGGGGGCTGCAGTCTCGGCCGGCTGGGACCTCTCCAAGCACCTCAAGATCTGA
PROTEIN sequence
Length: 160
LADLFLKIDGIPGESLDNKHKDEIELVAFGWGVSSQVAEGHAGGGAGAGRAHFQDFHFTTRVNKASPQLFLAVASGKHIKEASLSVRRAGKQQLEYLKIKFSDVLVTSFQEGGADGTVPEETIGFAFSRIQLEYSPQGPRGSAGAAVSAGWDLSKHLKI*