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PLM2_5_b1_sep16_scaffold_7059_5

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 4268..4870

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family Tax=Pseudomonas stutzeri RCH2 RepID=L0GRE1_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 118
  • Evalue 6.40e-24
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 118
  • Evalue 1.80e-24
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 194.0
  • Bit_score: 298
  • Evalue 6.30e-78

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
TTGTCACTGGCCCAGCCCGATCTAGGCGTCCTGCGGAAGGCGCAACGGGGTGACGAGCGAGCTTTCTCGCTCATCCTTCGCGCTTACGAGACGCCAGTCTTCAACTACGTGCTCCGGCTCGTGGGGGGAGACCGGTCGCTGGCAGAGGACCTGACACAAGAGGTCTTCCTGCGGGTCTACCAGGGTCTGCCGAAGTTCTCGCTCCGCTCGAAGTTCACGACGTGGCTCTTCCAGGTCACGAAGAACCGCGTGCTCGACGAGCTGCGGGCCAGCGAGCGCCGGCCCCGCTCGGTCGTCGCGATCGACGACATCGCCCCGCTCGAGGTGCTGGACGCGCCGATCGAGCGGCTCGAGGAGATCGACGCGCTCTGGCGCGGGATCGAGAACCTCAGCACCGACCTGAAGATGGCACTGCTCCTGCGCGACGTGGTCGGCCTCTCGTACACCGAGATCGCCGACTCGCTCGAGGTGACCCTCGCCACGGTCAAGTGGCGGATCTACAAGGCGCGGGAGGAAGTGCAGATCGCACTCACGCGCGAGGGCATCACCGTCGGCGACAAGCCGGCCGCCGCCGAGCCGGCAGCCGTCGAGCTCCAGGTTTAG
PROTEIN sequence
Length: 201
LSLAQPDLGVLRKAQRGDERAFSLILRAYETPVFNYVLRLVGGDRSLAEDLTQEVFLRVYQGLPKFSLRSKFTTWLFQVTKNRVLDELRASERRPRSVVAIDDIAPLEVLDAPIERLEEIDALWRGIENLSTDLKMALLLRDVVGLSYTEIADSLEVTLATVKWRIYKAREEVQIALTREGITVGDKPAAAEPAAVELQV*