ggKbase home page

PLM2_5_b1_sep16_scaffold_19064_7

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(4536..5456)

Top 3 Functional Annotations

Value Algorithm Source
copper resistance protein CopC; K14166 copper transport protein bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 286.0
  • Bit_score: 98
  • Evalue 8.00e-18
Copper resistance protein CopC similarity KEGG
DB: KEGG
  • Identity: 28.3
  • Coverage: 279.0
  • Bit_score: 86
  • Evalue 8.90e-15
Copper resistance protein CopC {ECO:0000313|EMBL:ACM05107.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.3
  • Coverage: 279.0
  • Bit_score: 86
  • Evalue 4.40e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermomicrobium roseum → Thermomicrobium → Thermomicrobiales → Thermomicrobia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 921
GTACCAACGCCCGCCGCTAGCTTTCTTGAAGTGTCGAGCCGTTCGCAGCGGTCGTTCACGGCGTTCGGGGCCCTCGTGCTCGTCGGGTCGTGCTCTGCCTGCTCCGGTGGCTCCGTCAACCGGGAGTCGCTGAACGTCGGCGTCGAGCGGGCGCCGGCGCCCCCGCGCGGGGCGCTCGTGCTCGGCGGCGAGTCCGGGAGCCGGGCGGTCGCGCTCGCCGTCGGGCGGGGCCGGGTGACGGCGACGGTGCTCTCGCCTGCCGGCGAGCCGCTCTCCGGGCTGAAGGTCTCGTTCGCCGCCGGCCCGCGCGTGGTCACCGCGCACGCCTGCGGGCACGGTTGCTACTCCGCGGCGATGCCACGTGCCCCGCAGGTCGAATTGAGACTGAGCGGAAGCCGGTCCGTTGTCTTCCGTGTCCCCGCGTCATCGCGCTCCGCCGCGGCGATCGTGGCCCGTGCAGCACGGGCAACCCGCTCGCTGAGCAGCCTCGTCTACGTCGAGTCGCTTCGCTCGGGCCCGAAGGGCGGCCTGCTCACGACCTGGGAGCTCGTCGCGCCGAACCGGGTCGAGTACCGGATCCGAGGGGGCGCCTCCGCGATCGTGATCGGCGAGCGCCGCTGGGACCGCGACAAGCCGGGCAAACGGTGGCGCCGCTCCCAGCAGCTTCCGCCGCTGCGCGTGCCGCAGCCCGCATGGGGCTCGGTGGCCACGAACGCGTACGTGCTGGGGAAGGCACGCGTCGACGGCCGCCCGGTCTGGGTCGTCTCCTTCGCCAACCCGACGACACCTGCCTGGTTCACGGCCTGGATCGACCGCGAGAACTACCGGCCGCTGCGTTTGCAAATGGCCGCGGCTGCACACTTCATGACGCACCACTACGTCGACTTCAACGGGCCGACCGCGATCAATCCGCCTAGATAG
PROTEIN sequence
Length: 307
VPTPAASFLEVSSRSQRSFTAFGALVLVGSCSACSGGSVNRESLNVGVERAPAPPRGALVLGGESGSRAVALAVGRGRVTATVLSPAGEPLSGLKVSFAAGPRVVTAHACGHGCYSAAMPRAPQVELRLSGSRSVVFRVPASSRSAAAIVARAARATRSLSSLVYVESLRSGPKGGLLTTWELVAPNRVEYRIRGGASAIVIGERRWDRDKPGKRWRRSQQLPPLRVPQPAWGSVATNAYVLGKARVDGRPVWVVSFANPTTPAWFTAWIDRENYRPLRLQMAAAAHFMTHHYVDFNGPTAINPPR*