ggKbase home page

PLM2_5_b1_sep16_scaffold_20625_6

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(3310..5271)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 675.0
  • Bit_score: 400
  • Evalue 3.90e-108
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B3E4AC similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 690.0
  • Bit_score: 407
  • Evalue 1.30e-110
superfamily I DNA and RNA helicase-like protein similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 675.0
  • Bit_score: 400
  • Evalue 7.80e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
CCCACTACGCTTCTCGCCGTGTCGCATCCCGATCTGCCAGCCGAGCAGGCCTACCTGGACGAGGCGTACGACTGCCTCGACCGCATGCGCGAGGCGCTCCTGCGCGCGGCGGGCGCAGGAGCGACCGAGGTCGCCGCGGAGGCGATCGAGACCTGGGCGACCGGCCGGTTGCGGACCTTCGAGGACGCCGAGCGAGGGCTCTGCTTCGGCCGGATCGACGCGGAGGGCACCGCGGACACGCTCTACGTCGGCCGCCGCTGGGTACACGACGACGCCCGCCGCGCGCTCGTCGTGAACTGGCAGGCGCCAGCCGCTCGCCCGTTCTACACGGCCACACCGGTTGCGCCACACGGCGTCACGCTGCGCCGCCGCTTTCGCACGCGTGGGCGGACCCTGCTCGACATCAGCGACGAGGCGCTGGACGGCTCGCTCGCCGACGCCGGCGGTGTGGACGACTTCCTGCTCGAGGAGCTCGAGCGCGCCCGTGACGCGCGCATGCGCGACATCGTTGCGACGATCCAGGCCGACCAGTACCGGCTGATCGCGCGCGAGCCGGAGCCGCCGCTCGTGATCCAGGGCGGCCCCGGCACGGGCAAGACCGCAGTCGGGCTCCACCGCGCCTCGTTCCTGCTCTACGCCCACCGCACGGAGCTGCGGCGCATCCTCGTCGTCGGGCCGAACCCGGCCTTCATGGAGTACGTCTCACACGTCCTCCCCGCTCTCGGCGAGGACAGCGTCGACCAGCGCGCCGTCCCCGAGCTCGTCGAGGGCGTCGAGATCACGCGGAGCGACTCGCTCGACGTGCAGCGCTTGAAGGCGGACGTCCGCGTCGGCGAGGTCGTTCGCAGGGCGGCCGAGCTCGCCTCACAGGGCGAGCCGCAGGAGCTGGTTGTCCGCCTCGAGGGCCGCTTCGTCGGAGTCGAGGCCGACGAGGCCGCCGAGCTGCTCGACGAAGCGCGCGCGGAGCTCGGTCTCTCGGCGGCCGCACGCGAGCGCTTCCGCATGAACGTGTTGCGCCGCTTCTACGAGGACTACGGCGTGCGGCTCGGTGGCGAGGCGTTCCGCTCGTTCGAGGAGGTCGAGCGCGCCCTGCGGCGCGACGGTCGGCTGACGAAGTTTCTGGACCGGGCCTGGCCCGCCCCCAAGCCGGAGCAGATCGTCAGGCGCCTGCTCGGAACGCGCGAGGGTCTCGCCGCAGCCGCGGACGGAATCCTCGACGCGGACGAGCAGACCCTCTTGCGCCGGACGCGGAGCGGCTGGAGTGAGGGCGACCTGCCGCTCCTCGACGAGGCGCGCGGCATCCTCCACGGCACCCCGCCGCGCTACGGGCACGTGATCGTCGACGAGGCGCAGGACCTGACCCCGATGCAGCTCCGCATGGTCTCCCGCCGCGCCGCGGGCTCGTTCACGGTGCTCGGCGACATCGCGCAGGCCACGGGCCCGATCGCGTACCACCGCTGGGAGGAGTTGCTGCCGCATTTGCCCGGAGGCGAGGCCGCCCAGGTGGAGGAGCTCCGCCATGCCTACCGCGTGCCGCGCGAGATCATGGCGCTCGCGCTGCCCCTGCTCGAGCGCATCGCCCCCGGGGTCGAGCCGCCGCTCGCGTACCGGACTGGTGCCGAGAGGCCACGCGTCGTCCACGCCGAGGATCCGCTGGCCGCCGCCTACGAGGAAGCGGGCCGACTCGCCGGCGAGGAGGGCCTGCTTGCGCTGATCGCCCCTGCCTCGCTACGCGGCGACGGCTCGACCTCGCTCTTCGACGACACGCGAATCGCAGTCCTCACCCCGCGCGAGGCGAAGGGCATGGAGTTCGACCACGTGATCGTCGTCGAGCCGGCGCTGATCCTCGAGGAGGCGGTGGAAGGCCAGGGCCTGCGCGAGCTCTACGTCGCCCTCACGCGCCCGACGACGACCTTGGTGCTCGTGCATGCCAAGCCATTGCCGCGCGAGCTGCAGCTTTGA
PROTEIN sequence
Length: 654
PTTLLAVSHPDLPAEQAYLDEAYDCLDRMREALLRAAGAGATEVAAEAIETWATGRLRTFEDAERGLCFGRIDAEGTADTLYVGRRWVHDDARRALVVNWQAPAARPFYTATPVAPHGVTLRRRFRTRGRTLLDISDEALDGSLADAGGVDDFLLEELERARDARMRDIVATIQADQYRLIAREPEPPLVIQGGPGTGKTAVGLHRASFLLYAHRTELRRILVVGPNPAFMEYVSHVLPALGEDSVDQRAVPELVEGVEITRSDSLDVQRLKADVRVGEVVRRAAELASQGEPQELVVRLEGRFVGVEADEAAELLDEARAELGLSAAARERFRMNVLRRFYEDYGVRLGGEAFRSFEEVERALRRDGRLTKFLDRAWPAPKPEQIVRRLLGTREGLAAAADGILDADEQTLLRRTRSGWSEGDLPLLDEARGILHGTPPRYGHVIVDEAQDLTPMQLRMVSRRAAGSFTVLGDIAQATGPIAYHRWEELLPHLPGGEAAQVEELRHAYRVPREIMALALPLLERIAPGVEPPLAYRTGAERPRVVHAEDPLAAAYEEAGRLAGEEGLLALIAPASLRGDGSTSLFDDTRIAVLTPREAKGMEFDHVIVVEPALILEEAVEGQGLRELYVALTRPTTTLVLVHAKPLPRELQL*