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PLM2_5_b1_sep16_scaffold_40054_3

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 1632..3239

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, SARP family Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGN6_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 248.0
  • Bit_score: 221
  • Evalue 1.10e-54
Uncharacterized protein {ECO:0000313|EMBL:EWT03221.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 309.0
  • Bit_score: 251
  • Evalue 2.40e-63
SARP family transcription regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 415.0
  • Bit_score: 224
  • Evalue 6.30e-56

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1608
TTGCTCGGCCCGCTCGAGGTGACCAGCGAAGGCGCAGCTTTGGAGCTCGGGGGCCCGAAGCAGCGCGCCCTCCTCGCGCTGCTCCTGCTCGACGCGGGCCGTGCGGTCTCCACTGACCGGTTCATCGAGGCCCTCTGGGGCGAGCAGCCGCCACGAACGGCCGCGACGTCGCTCCAGAACTTCGTCTCGCAGCTGCGAAAGGTGCTCGGCCCCGACCGGATCGTCACGAAGCCGCCCGGGTACCTGATCCGCATCGACTCGTCCGAGCTGGACGTGAACCGGGCGCAGACGCTCCTGGACGAGGCGAAAGTCGTTCCCGCGAGCGAGCGCTGCACGAAGCTCCGCGACGCGCTTGACCTCTGGCGCGGCCCGCCGCTCGAGGAGTTCGGCTACGAGGCCTTCGCGCAGAGCGAGATCGCGCGGCTCGAGGAGCTGCAGCTGACGATCCTTGAGGAGCGGATCGAGGCCGAGATCGAGGTCGGGGAGCCAGGGAACCTCATCGGCGAGCTCGAGGCGCTCGTCGGCCGGCACCCGCTGCGGGAGCGGTTCCGGGAGCAGTTGATGCTCGCGCTCTACCGCTCAGGCCGGCAGGCGGAGGCACTCGATGCGTTCCAGCGGGGTCGCCGTGCGCTCGTCGACGAGTTGGGGATCGACCCGAGCCCGCGGCTGCAGCAGCTCCACGCCGCGATCCTCCGCCAGGAAATCAACCTCGTGCCCGCCCGCGCGGTTCCTGCGCAGGATCACTTCGAAGACGTCGCCCGAACCATCCTCGAGGGCCGGGTCGTCCCGGTCCTCGGCACCGACGTCGGGGAGCTCACGCTTCGGCTCGCGCAGCGCTTCGGCTACCCAGAGGACGGCGGGCGGGCGACGCTGCCGTCGGTCGCGCAGTACGTCGCCGTGATGAAGGGCTCGGGGCCGCTCTACGACGAGCTCCACGACCTCCTCGACGCCGACCTGCCGCCCACGCCGCTACATCGCCTTCTCGCGTCGCTCCCCGCACTTCTCCGCGAGCGCGGGCTGCCACCCCAGGTCGTGGTGACGACGGGCTACGACACGGCGCTGGAGAAGGCGTTCGAGGAGGCGGGCGAGGCCGTCGAGGTCGTGACCTATCTCGCCGCCGGCCGCAATCGCGGCCGCTTCTGCCACATCGCGCCGGACGGCGCCGGCAGGCTGATCGAGGAGCCGAACACCTACGCCACCGAGCTCTCCCACAACACGGTGCTCCTCAAGCTCCACGGCCAGGTCGAGCGCACGCCTGCGCGCGAGTGGGAGAGCTTCGTCGTGACGGAGGACGACTACATCGACTACCTCGCGCAGACGGAGATCGCGGCGGCGGTGCCGGTCTCGCTCGCGGCGAGGCTCCGCCGGAGCCACTTCCTCTTCCTCGGCTACACGATGGCCGACTGGAACCTTCGCGTGATCCTCCATCGGCTATGGGGCGACCAGCCCCTCAGCTACCACTCGTGGGCCTTGCAGCCTGAGCCGAAAGCGCTCGAACGGGAGTTCTGGCACCGGCGCGACGTCGACGTGGTCGAGCTGCCGTTCGAGGAGTACGCCGGGATCCTCGGCAGCTACCTGGCTGCCCAACCGGCCGGCGCGAACGCATGA
PROTEIN sequence
Length: 536
LLGPLEVTSEGAALELGGPKQRALLALLLLDAGRAVSTDRFIEALWGEQPPRTAATSLQNFVSQLRKVLGPDRIVTKPPGYLIRIDSSELDVNRAQTLLDEAKVVPASERCTKLRDALDLWRGPPLEEFGYEAFAQSEIARLEELQLTILEERIEAEIEVGEPGNLIGELEALVGRHPLRERFREQLMLALYRSGRQAEALDAFQRGRRALVDELGIDPSPRLQQLHAAILRQEINLVPARAVPAQDHFEDVARTILEGRVVPVLGTDVGELTLRLAQRFGYPEDGGRATLPSVAQYVAVMKGSGPLYDELHDLLDADLPPTPLHRLLASLPALLRERGLPPQVVVTTGYDTALEKAFEEAGEAVEVVTYLAAGRNRGRFCHIAPDGAGRLIEEPNTYATELSHNTVLLKLHGQVERTPAREWESFVVTEDDYIDYLAQTEIAAAVPVSLAARLRRSHFLFLGYTMADWNLRVILHRLWGDQPLSYHSWALQPEPKALEREFWHRRDVDVVELPFEEYAGILGSYLAAQPAGANA*