ggKbase home page

PLM2_5_b1_sep16_scaffold_80065_1

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 1..639

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 238.0
  • Bit_score: 144
  • Evalue 3.30e-32
tRNA pseudouridine synthase B Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW51_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 238.0
  • Bit_score: 144
  • Evalue 1.20e-31
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 171.0
  • Bit_score: 204
  • Evalue 1.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
AACGGGCTTCTGCTTGTCCTGCTCGGCTCCTCGACCCGGCTTGCGCGGTTCCTCGTCGGGCTGGACAAGCGCTACGTGACCGAGGTCGACCTGCGCGCGCGCACGTCGACCGGCGACCGCGAAGGCGACGAGCTCGAACGGCTCGAGCCGCCTCCGAGGCCGGAGCTCGAGGCCGCGGTCGCGGCGCTCGAGGGTGAGGTCGAGCTGCAAGTGCCTGCGGCCTCGGCCGTCAAGATCGAGGGCGAACGGGCCTACAAGCTCCACCGGCGCGGGGTGGAGGTCGAGATGCCACTGCGACGCTCGCGGGTGGAGTCCGCGCGCCTGGTGGACTACGAGGAAGGCGTCGCCAGGTTGGACCTGCGCGTTGGCTCCGGCACCTACGTGCGGGCGATCGCGGATGCACTCGGCGGCCACTGCCGCACCCTGCGCCGGACCGAGGTCGGGCCCTTCTCCGTTGAGGACGCGGACGAGGCGCGGATCCTCTCACCGGTCGAGACGCTCCCCTTCCTGCCGCTCGTCGAGGTGGACGAGGAGGAGGCTCGCGCCATCAGGACGGGGCGGCGCCGGCGCGAGGACCAGGTCCGGGTCGTCCACGGCGGCGCGCTCGTGGCGGTGAACGGAACGGTCCTCCCGGAATGA
PROTEIN sequence
Length: 213
NGLLLVLLGSSTRLARFLVGLDKRYVTEVDLRARTSTGDREGDELERLEPPPRPELEAAVAALEGEVELQVPAASAVKIEGERAYKLHRRGVEVEMPLRRSRVESARLVDYEEGVARLDLRVGSGTYVRAIADALGGHCRTLRRTEVGPFSVEDADEARILSPVETLPFLPLVEVDEEEARAIRTGRRRREDQVRVVHGGALVAVNGTVLPE*