ggKbase home page

PLM2_5_b1_sep16_scaffold_92343_3

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 1653..2543

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family bin=GWC2_Nitrospirae_57_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 296.0
  • Bit_score: 217
  • Evalue 1.50e-53
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 292.0
  • Bit_score: 204
  • Evalue 3.70e-50
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 296.0
  • Bit_score: 382
  • Evalue 4.90e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGATACACGCCAGCTGGCGGCCTTCTGCGCGGTGGTCGAGCGCAAGAGCTTCTCGCAGGCGGCCGAGCGTCTGGGTGTGACCCAGCCGGCGGTCAGCCTGCAGGTGCGGTCGCTCGAGAAGCGGCTCAATCGCAAGCTGCTCGATCGTTCGGGCAGGCGCGTCGAGCCGACCGAGGCAGGGCTCGCCCTCTACCGCGGGGCCCAGCGCATGCTGGCGCTCGAAGGCCAGCTGATCGAGGAGCTCGACGCCGGCGAGGGCGGCGACCTGGGCGGCACGCTGCAGGTAGGAGCCTCGACCGGGCCCGGAAGCACCGTCGTCCCGGTGCTGCTGTGCGAGTTCCAGCGCGCCAATCCTGGTGTCGCGGTCTCACTCTCGATCTCCGACACGCAGTCGGTCGTCGACCGGGTCGCCGAGCGGGAGCTCGAGCTCGGCGTCGTCGGCGCCGCGCGGAGGCACAGGGGAGTGGTCTTCGAGCCGTTCTTCCGCGACGAGGTTGTCCTCGCCGTGCCGCCCGACCACCGCTTTGCAGGCAGCACCGTCAGCCTCGAGCAGCTGCGCGAGGAGCCGCTGATCGTGATGCAGGAAGGCGCCGGGGTGCGCCAGGTGATCGAGGACGAGCTGCGTGGGGCAGGCACGCGGCTACGCGAACTCGAGCCCCGCCTCGAGCTCGGTCTGCAGGAGTCCGTGAAGGCGGCCGTCGTCGCCGGCTACGGCGTGACGTTCATCTCGCGCGCCGCGATCGAGTCCGACCTCGCCGCGGGAACCCTTGCGACGGCCCGCGTGAAGGGCCTCGACCCCGCGCGCGAGATCTCGCTTGTCCGCTCGGCCGGGCGCTCGCCGACGCGCGCGGCGGAAGCTTTTCTGGACTTCGCGCGCGAACGCCTGTGA
PROTEIN sequence
Length: 297
MDTRQLAAFCAVVERKSFSQAAERLGVTQPAVSLQVRSLEKRLNRKLLDRSGRRVEPTEAGLALYRGAQRMLALEGQLIEELDAGEGGDLGGTLQVGASTGPGSTVVPVLLCEFQRANPGVAVSLSISDTQSVVDRVAERELELGVVGAARRHRGVVFEPFFRDEVVLAVPPDHRFAGSTVSLEQLREEPLIVMQEGAGVRQVIEDELRGAGTRLRELEPRLELGLQESVKAAVVAGYGVTFISRAAIESDLAAGTLATARVKGLDPAREISLVRSAGRSPTRAAEAFLDFARERL*