ggKbase home page

PLM3-1_170_b1_sep16_scaffold_20384_3

Organism: PLM6_170_b1_sep16_Acidobacteria_64_20

near complete RP 49 / 55 BSCG 48 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 2333..3115

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 252.0
  • Bit_score: 288
  • Evalue 1.00e-75
Pseudouridine synthase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q94_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 252.0
  • Bit_score: 288
  • Evalue 3.60e-75
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 254.0
  • Bit_score: 292
  • Evalue 4.50e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGTGCGCAGCATCCAACACCGCCGCACAGCGGTTCGTCGTCGCCGCGGAGCACGCCGGCGCGCGGCTCGACCGCTACCTCGCCGAGCGCCTGCCCGAGTTGAGCCGCACGCGCATTCAGGAGTTGATTGACGAAGGACGCGCGCGCGTGAACGGCGCGCCCGCGCGGCGCGCGCATCGCGTGGCCGCCGGGGAAGCCATCGAGATCGCAATTGTGCCGCGGCCGCCGCTTGCAGCCGTTCCGGAGGCGATTCCGCTCGAGGTTCTTTACGAAGACGACGACTTAGCCGTGGTGAACAAGCCCGCGGGGATGGTCGTGCACGCGGGCGCCGGCGCGGCGCACGGCACGCTCGTCAACGCCTTGCTGCATCGCTACGGCTCGCTTTCGGGCGCGAGCGGCGCGCTGCGGCCGGGCATTGTCCATCGCCTCGACCGCGGCACTTCGGGTGTGCTTGTGATCGCGCGAAACGACCTGGCGCACCGCAAGCTCGCCGAGCAATTCCACGCGCGCCAGGTGGAGAAGACGTACCTTGCGCTCGTCCACGGGCGGCTCGAGCGCGACCGCGGCACAATCGCGCTGCCGATTGCGCGCGACCTGCGACGGCGCACGCGCATGACGGCCCGGCGTCGCGAAGGCCGCGAAGCACGCACGGACTGGCGCGTGCTGGCGCGCCTCGACGTCTTCACGCTCGTCGAAGTCGCGCTGCACACCGGCCGCACGCACCAGATCCGCGTACATTTCTCGGCGCTCCGGCATCCCGTGGTGGGCGACGCGCTCTACGGC
PROTEIN sequence
Length: 261
MCAASNTAAQRFVVAAEHAGARLDRYLAERLPELSRTRIQELIDEGRARVNGAPARRAHRVAAGEAIEIAIVPRPPLAAVPEAIPLEVLYEDDDLAVVNKPAGMVVHAGAGAAHGTLVNALLHRYGSLSGASGALRPGIVHRLDRGTSGVLVIARNDLAHRKLAEQFHARQVEKTYLALVHGRLERDRGTIALPIARDLRRRTRMTARRREGREARTDWRVLARLDVFTLVEVALHTGRTHQIRVHFSALRHPVVGDALYG