ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1170_14

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(10899..11576)

Top 3 Functional Annotations

Value Algorithm Source
rpe; ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 217.0
  • Bit_score: 272
  • Evalue 2.30e-70
rpe; d-ribulose-5-phosphate 3-epimerase (EC:5.1.3.1) similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 227.0
  • Bit_score: 261
  • Evalue 1.50e-67
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 223.0
  • Bit_score: 354
  • Evalue 8.40e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 678
TTGAACGTACGCATCGCTCCGTCCATTCTATCCGCTGACTTCGCCACCCTCGGCGCCGCTATCGCCGCGGCGGAACGAGGTGGCGCGGATCTGCTTCACGTGGACGTCATGGACGGACACTTTGTTCCGAACATCACTGTCGGCCCGCTTGTCGTTCGGGCGATCAAGCGGGTCGCCACGGTGCCGCTTGACATCCATCTGATGATTTCGGACCCCGACCGATACATCGAGGCGTTCGCCGAGGCTGGCGCCGCGATGATGTCGGTGCACGTGGAAGTCCTTCCTCATCTGCATCGCACGCTCACGGCGATCAAAGGGCTCGGCGTCAAGGCAGGTGTCGTCCTGAATCCCTCGACTCCCGTCGTGAGCATCGAAGAAGTCGCCGGCGACGTCGACTTCGTCCTCGTCATGTCCGTCAACCCCGGTTTTGGAGGTCAAGCGTTCATTCCCAGAAGTGAAGCCAAGGTCCGCGCGGTCCGAACGTTGCTCGATCGTGCTGGCAGCACGGCTCCGGTCGAAATCGACGGAGGCATCAACACGTCCAATGCCCCGCGTGTCGTCGCGGCAGGCGCCGAGATCCTCGTCGCGGGCGCGGCGATCTTCCACACACCGGATCCGGAGGCCGCGACCCGCGCACTCAAGGCCGCCGCCAGGTCACCGATTGCAGCCAGCCGGTAG
PROTEIN sequence
Length: 226
LNVRIAPSILSADFATLGAAIAAAERGGADLLHVDVMDGHFVPNITVGPLVVRAIKRVATVPLDIHLMISDPDRYIEAFAEAGAAMMSVHVEVLPHLHRTLTAIKGLGVKAGVVLNPSTPVVSIEEVAGDVDFVLVMSVNPGFGGQAFIPRSEAKVRAVRTLLDRAGSTAPVEIDGGINTSNAPRVVAAGAEILVAGAAIFHTPDPEAATRALKAAARSPIAASR*