ggKbase home page

PLM3-1_170_b1_sep16_scaffold_9110_4

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(3021..3737)

Top 3 Functional Annotations

Value Algorithm Source
TonB-like protein; K03832 periplasmic protein TonB bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 245.0
  • Bit_score: 210
  • Evalue 1.10e-51
TonB family protein similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 248.0
  • Bit_score: 138
  • Evalue 1.50e-30
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 238.0
  • Bit_score: 236
  • Evalue 2.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCCCAAGGAGATGTTTCAGCTACTGGTGTGCCCGGCCGAAGATTCGACGCGCCAATGGTACACGCTGCCGGTGTCGCTCCTCGTGCACATCGTGCTGCTCGCGGCGGCGATCGTCGTCCCGCTCGTGGCGACTGATGCGCTGCCGGCACCAAGAGCGATGCTCGCGTTCATGACCACCGGGGCGCCTCCGTCGGTGCCGCCACCCGCTCCGCCATCCGCCGCCGTGCAGAAACGGATTGTCGAAGAGGCTTCCACGACGGCGGCCCCGATCGAAGCGCCGTCAGGGATTGCCCCTGAGTCGCTCATTGACGTCGAATTCGATCAAAGCATCCACGGCAACATGCTCGATGGTGTGCCGGACGGCCTTGTGCTCGGCCCCGGGACGGGCACGGTTGACGCGCCACCTCCACCGCCGCCCGTGCCGCAGCAACCCGTGAGACCGGGCGGTCAGATCAAGGCACCGACTCGCATCAAATATGTACCGCCTGTCTACCCCGCGATCGCACAGAGAGCCCGCGTCCAGGGGGATGTGATGATCGAAGCCGTGATCGCTCCAGATGGAAAAGTGCGAGAGATGCGGCTGCTGCACTCGATCCCACTGCTCGATCAGGTCGCGCTCGACTCGGTTCAGGCGTGGGAATACACGCCGACATTGCTCAACGGCCAGCCGGTGGCGGTGATCATGACGGTGACCGTGCGGTTCAGATTGAATTAG
PROTEIN sequence
Length: 239
MPKEMFQLLVCPAEDSTRQWYTLPVSLLVHIVLLAAAIVVPLVATDALPAPRAMLAFMTTGAPPSVPPPAPPSAAVQKRIVEEASTTAAPIEAPSGIAPESLIDVEFDQSIHGNMLDGVPDGLVLGPGTGTVDAPPPPPPVPQQPVRPGGQIKAPTRIKYVPPVYPAIAQRARVQGDVMIEAVIAPDGKVREMRLLHSIPLLDQVALDSVQAWEYTPTLLNGQPVAVIMTVTVRFRLN*