ggKbase home page

PLM3-1_170_b1_sep16_scaffold_5963_7

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(5184..5678)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Geobacter sp. (strain M18) RepID=E8WI17_GEOS8 similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 155.0
  • Bit_score: 189
  • Evalue 1.90e-45
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 155.0
  • Bit_score: 189
  • Evalue 5.20e-46
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 163.0
  • Bit_score: 236
  • Evalue 1.40e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGTTCGCGATTATCGGATAGGACACGGATTTGATGCCCATCGGTTCCAGCGCGGGCGAAAGTTCATCCTTGGCGGAGTCGAGATACCTCATGCCTCCGGATTGATCGGTCATTCGGATGCCGATGTGCTCCTTCACGCCTTGATCAATGCGCTGCTGGGCGCGATGGGCAAAGGAGATATCGGCAGCCATTTTCCGGACACGGACCCCCGCTATAAAGGAATCTCCAGCCGGATTCTCCTCAAGCGCGTGTTGAAAATCATGGAGCGGGATAAGTGCCGAATCGTTAATGGGGACATCACGCTTTTGGCCCAAAAGCCCCGACTGGCTCCCTTCTTCAAGACGATTAGAGGCAAGCTGGCCCGGCTTCTGGAGGTCAAGGAGGAACAGTTGAATCTCAAGGCGGGCACTACGGAGAAGTTGGGCTGGATCGGGCGAGGACAGGGAATGGCCGCGATCGCGGTGGTATTAATTGAAAAGGATAGAAGAAGGTAA
PROTEIN sequence
Length: 165
MVRDYRIGHGFDAHRFQRGRKFILGGVEIPHASGLIGHSDADVLLHALINALLGAMGKGDIGSHFPDTDPRYKGISSRILLKRVLKIMERDKCRIVNGDITLLAQKPRLAPFFKTIRGKLARLLEVKEEQLNLKAGTTEKLGWIGRGQGMAAIAVVLIEKDRRR*