ggKbase home page

PLM3-1_170_b1_sep16_scaffold_6592_7

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(3358..4005)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 213.0
  • Bit_score: 316
  • Evalue 1.30e-83
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 214.0
  • Bit_score: 220
  • Evalue 3.60e-55
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 213.0
  • Bit_score: 316
  • Evalue 1.80e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGACGGTAAACGGTGCGGTCGTAAAGAAGCTCGGTTCTCAGGCGGATCCGGACAAAGACAAGATCAAGGTCAACGGGAAGCTCCTCGCTACCCCGTCACGGCTCTATTATCTGTTTCATAAACCTGCCGGTTTGATCACCTCGATGGATGACCCGGAGGGCCGTCCCCACTTGGGACAACGGCTGGAATCCTTAGGCAAGCGGGGACGCGTTTTGCCGGTAGGGAGATTGGATTTCAATACCGAGGGAGCGCTCCTGCTCACCAATGACGGCGAGCTGGCGCATCGTCTTACCCATCCGCGCTATCAGGTTCCCAAGAGCTATCGGATAAAGATCAGCGGCTCCCCATCCGAAGCAGAGCTGGACCGTTTGCGCAGGGGCATAAAACTTGAGGACGGGATGACTGCACCTGCGAATGTTCGGCTCCTGGAGCCTCTAAGGAAGGGCGCCTGGGTCGAGGTGGAGATCCGCGAGGGGCGCTATCGCGAGGTGCGCAGGATGTTTGAGGCGCTGGGATATTTCGTGGAGAAGTTGATACGCGTCCGCTTCGGTCCGATCCGCCTCGCTTCTCTTCCCTCAGGTGAAATCCGTCCGCTCCTGCCACGGGAAATCAGCACGCTGAAACGATCCGTAGGAATGCAGGCTTAG
PROTEIN sequence
Length: 216
VTVNGAVVKKLGSQADPDKDKIKVNGKLLATPSRLYYLFHKPAGLITSMDDPEGRPHLGQRLESLGKRGRVLPVGRLDFNTEGALLLTNDGELAHRLTHPRYQVPKSYRIKISGSPSEAELDRLRRGIKLEDGMTAPANVRLLEPLRKGAWVEVEIREGRYREVRRMFEALGYFVEKLIRVRFGPIRLASLPSGEIRPLLPREISTLKRSVGMQA*