ggKbase home page

PLM3-1_170_b1_sep16_scaffold_11215_5

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(3485..3979)

Top 3 Functional Annotations

Value Algorithm Source
carD-like transcriptional regulator; K07736 CarD family transcriptional regulator bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 159.0
  • Bit_score: 98
  • Evalue 4.30e-18
CarD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 158.0
  • Bit_score: 88
  • Evalue 1.60e-15
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 162.0
  • Bit_score: 228
  • Evalue 6.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGATACTGAACGTTGGGAATAAGGTTGTTTATCCGTCTCAGGGACCCTGTCTTATCAGCGCGGTAGTAAAAAAGGTGGTCGATGGCAGGCCGATGAGCTTCTATCATTTGGCTCTCTTGGACGATAGCCGCGGCGGGTTGTTCGTCCCCATAGGTAAAGTCCAGACCCTAGGTATTCGGCAGTTACTGGAAAAGTCTGAGATTCCGAAGCTGCTGAGCCGCCTAAAAAAGGCAGCCGGAACAGCCAAGAACTGGAAGCAGCGTGCCATGGACAACTTGAAACTGTTCGCCTCCGGGTCGGCATTTGATTTGGCTGAGGTCGTTGAGTCACTGACCGAGTTGAGCGAGACGAAGACGCTATCGCCTCGCGACAAGGAGACACTGGAAAGGGCGAGAAAGCTGCTGGTTTGCGAGATCTCTGAAGTGACGGGAGAGACAAAGAGCGCCGCCGGGAAACAGGTAGACGAGGCTCTCAAAATGCGAAAAAGGGAATGA
PROTEIN sequence
Length: 165
MILNVGNKVVYPSQGPCLISAVVKKVVDGRPMSFYHLALLDDSRGGLFVPIGKVQTLGIRQLLEKSEIPKLLSRLKKAAGTAKNWKQRAMDNLKLFASGSAFDLAEVVESLTELSETKTLSPRDKETLERARKLLVCEISEVTGETKSAAGKQVDEALKMRKRE*