ggKbase home page

PLM3-1_170_b1_sep16_scaffold_12504_4

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 2702..4153

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 458.0
  • Bit_score: 451
  • Evalue 1.00e-123
radical SAM protein with cobalamin binding-like domain similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 454.0
  • Bit_score: 444
  • Evalue 2.00e-122
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 463.0
  • Bit_score: 484
  • Evalue 1.20e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OP11_Daviesbacteria_43_11 → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1452
ATGGGCATGGTGGATGTGCTCTCGCACGTCCTCCCTACCAATATCGGATATCTCGCTGCGTATTTAATGAGGCATGGTTTTGCGGCGGACATTTGGGACTATGAGATCGAGCGCTTCACGGTCCGGGGTTTCCTAGATCGCGTGGCCGCCGCGTCGCCTCAGGTGATCGGCTTTAGCTGCATGACTCCCACGATCATCAACGGCGCCGTTATGGCGTCGCTGGTGAAGGAGCACTTTCCGCAGATCGTAACGGTCGTGGGCGGGGCGCACTCCTCGGCCCTGCCGGAAGAGACGCTGCGGGAGTTTCCCGCCTTCGACGCCGTGGTCTGTCAGGAGGGGGAGCTGACGTTAGCCGAGCTGTGCATGCGCCTGGAAGGAGGAGGGGGTCTCTCGGGGATCCGCGGTTTGGTCCATCGGACGGACGGTGAGATCGTCAGAGAGGAAGCCAGGGAGTTCGGCGATATCGACAGTTTTCCTTGGCCTGCGCGCCACCTGTATCATCGGCCGGGGCGGCAGCGGGGCCACAGCAGCCGGGGCTTTTCCAATCAGCTGGTGAGCACGGAGATCTTCACCTCACGGGGCTGCCCCTACCACTGCACCTTCTGCGCCATCGTGGCGACGTTCGGCCGCTCCGTGCGCTGGCGTGAGCTCGATGACGTCTTCGCCGAGACCAAAGATTGCATCGATCGTTACCACATCGATCACTGTGTCATCGCGGACGACACCTTCGGCCTCAAGGCCGGACGTGCTTTGGAGCTGAGCGAAGGGTTTGCGCGGATGGGTCTCAACTCCTGGAGCTGCGACACTCGCGTGGACTGCGTAAATCCCGAGATCCTTCGGGCGATGGCGCGCTCGGGTTGCCGAAAAGTTGCCTTTGGGATCGAGTCGGGAAGCCCCCGTGTGATTCAACTGAATAAGAAGAAAATCACTCTCGAGCGCGTCGAGCAGGCGGTGCGATGGGCTTGGGAAGCCGGGATCAAGCATGTGGAAGGGAATTTCATCATCGGCAGCCATCCGGACGAGACGCCGGAGGACATCGACCTTACGGTCAAGTTGATGCGCAAGCTGAAGCTCAGCTTCGCGTCCGTCTCGATTATCGTCCCATATCCGGGAACCGAAGACTATGTCACGATGGAGCGCCGCGGTCATATCTACTCCAAAGATTGGTCCAACTACGTGATGTTCGGCCAGACGCCGCGTTGGCGAACCACCTATTTCGAGCCGGAGGATCTGTTGCGGCTTCAGAAGCGGATGAACCGGGCCTTCTATCTAAACCCGCGCTACCTTACGCAGGTTCTGCTCGGGATTCGCAGCCTGAGCGAGCTTGGCTATTACGTCAAGGCAGGTCTCAGCTTCGCTAAGTGGCTTGCCGGTCTCAGCCTTGTGCCGGAGAATGCGGCCGGAGATCTGCGTGCATTAAAGTCCTCGCTGTGCTCGGAATCGTTCGACTGA
PROTEIN sequence
Length: 484
MGMVDVLSHVLPTNIGYLAAYLMRHGFAADIWDYEIERFTVRGFLDRVAAASPQVIGFSCMTPTIINGAVMASLVKEHFPQIVTVVGGAHSSALPEETLREFPAFDAVVCQEGELTLAELCMRLEGGGGLSGIRGLVHRTDGEIVREEAREFGDIDSFPWPARHLYHRPGRQRGHSSRGFSNQLVSTEIFTSRGCPYHCTFCAIVATFGRSVRWRELDDVFAETKDCIDRYHIDHCVIADDTFGLKAGRALELSEGFARMGLNSWSCDTRVDCVNPEILRAMARSGCRKVAFGIESGSPRVIQLNKKKITLERVEQAVRWAWEAGIKHVEGNFIIGSHPDETPEDIDLTVKLMRKLKLSFASVSIIVPYPGTEDYVTMERRGHIYSKDWSNYVMFGQTPRWRTTYFEPEDLLRLQKRMNRAFYLNPRYLTQVLLGIRSLSELGYYVKAGLSFAKWLAGLSLVPENAAGDLRALKSSLCSESFD*