ggKbase home page

PLM3-1_170_b1_sep16_scaffold_13656_2

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 1172..1870

Top 3 Functional Annotations

Value Algorithm Source
GAF sensor signal transduction histidine kinase bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 238.0
  • Bit_score: 220
  • Evalue 1.10e-54
PAS sensor protein similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 234.0
  • Bit_score: 130
  • Evalue 4.10e-28
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 238.0
  • Bit_score: 220
  • Evalue 1.50e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGACAGGTCGCGCCGGCAAGAGCATCTCCGCATTCTCCACGAGCGGATCGCCGAGCTGGAGAGGGCAAACAAGGTCAAGACGGAGTTCCTCAGCGTCGTGTCGCATGGGCTCAGGACGCCCCTCAATATGATCATGGGTTATACGAGCATGGTTCAGGACAGAGTCTTGGGGGAGATCAACGCCGAGCAGGAAAAATGCATGGGCAAGGCGCTCAGGTACTGCAATGAACTGCTCACGATGATCAACAGCCTCTTGGAGGCAACCCGCATCGAGGCCGGGTCGGTCGTCGTGGAGAGGCAGCAGGTGGATTTGAAAACGTTTCTCGACGAACTCAAGGCGGTTTACGATATTCCTCTGGATAAAGAGCCTGTCCTCATCTGGGACTATCCATCGGACCTGCCCGTGCTGGAGACAAGAGAGAAGAAACACACAGCCCACGAGTCCGCGCCTCACGCCTTCGTTGAGTTCAAGGTGGCGGATACCGGGGAAGGAATTTCCCAGGAAGCGTTGCCCGTCCTCTTCGAGATGTTTCGAGAAGTCAACGGCCCCGAGATGAAAGTCTACGGCAGCATCGGTCTGGCGCTCCATATCGTCAAGACCTTCACTGAAATACTCGGTGGGAAGGTGTCGGTCGAAAGCAAGCCTGATAAAGGCTCCATTTTTACCGTCACGATCCCCTGTCTTGTTGACAAATGA
PROTEIN sequence
Length: 233
MDRSRRQEHLRILHERIAELERANKVKTEFLSVVSHGLRTPLNMIMGYTSMVQDRVLGEINAEQEKCMGKALRYCNELLTMINSLLEATRIEAGSVVVERQQVDLKTFLDELKAVYDIPLDKEPVLIWDYPSDLPVLETREKKHTAHESAPHAFVEFKVADTGEGISQEALPVLFEMFREVNGPEMKVYGSIGLALHIVKTFTEILGGKVSVESKPDKGSIFTVTIPCLVDK*