ggKbase home page

PLM3-1_170_b1_sep16_scaffold_38099_5

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 3199..4440

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate dehydrogenase E1 component bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 373.0
  • Bit_score: 657
  • Evalue 6.10e-186
2-oxo-acid dehydrogenase E1 subunit, homodimeric type similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 411.0
  • Bit_score: 556
  • Evalue 4.10e-156
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 414.0
  • Bit_score: 686
  • Evalue 1.70e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGAACCTCAAAACAAATCACGAGGCACTCCGTGGAACGAGCGGAGTCCGGACAACTCGCGGCCGGAACTCTTTGAGACAAGAAAGTGGCTTGACTCGCTGGAGTATGTGTTCGAGCACATTTTAAAACATGAGGAGTCGGAACGGACCTCTCTCTTTCTGGACGAACTGATCGAGAGGCTGCGCGATTCCGGGGTCAAAATTCCCTACGCGGTCAATACGCCCTACCTGAATACGATACCCGCAGAAGAAGAGCCTCCCTACCCGGGCAACCGGGAGATCGAGCGCAGGATCAAGAGCTTTGTCCGCTGGAACGCCATGGCCATGGTGGTCAAGGCCAACCGGCTCCACAACGACATCGGCGGCCACATCTCGACCTTCGCCTCCTGCGCCACGCTCTACGAAGTAGGATTCAACCACTTCTTCCGAGGGGGTGACGGCGGCAGTCCGGCGGATATGGTCTATTTTCAAGGGCACGCCTCTCCGGGCAACTACTCGAGGGCCTATGTGGAGTGGAGGATGAACGCGCCGCGGCTGCATCGCTTCCGTCAGGAACTGGCCGACGGCGGAGGCGTATCGTCTTACCCCCACCCTTATCTCATGCCGGACTTCTGGCAGTTTCCCTCCGTCTCCATGGGTCTCGCGCCGATCATGTCGATCTATCAGGCGCGCTTCAATCGCTATTTACAAGCCCGAGGTTTTTCGACCGGGGAAGAGCCGAGAGTGTGGTGTTTTGTAGGCGACGGCGAGATGGATGAGCCGGAATCATCCGGCGCCTTGACCTTGGCTTCGCGGGAAAATCTCGACAACCTCACCTGGGTGGTCAACTGCAATCTCCAGCGGCTCGACGGCCCCGTCAGGGGCAACGGAAAAATCATTCAGGAGCTGGAGGCCCTCTTTCGCGGCGCGGGATGGAACGTCATCAAAGTGATCTGGGGTTCCGACTGGGACCCTCTTCTCCAGGCCGATCACAAGGGACTCTTGCTCAAGCGGATGGAAGAGGCTGTGGACGGGGATTACCAGAAATATTCCGTCGAGCCGGGCAGCTACACGAGAAAGCACTTCTTCGGCAAATATCCGGAACTCTTGGAGATGGTCAATCACCTCACGGACGATCAGATCCATAAGCTGCTCAGAGGCGGGCATGATCCCAAAAAAGTCTATGCGGCATACAAGGCGGCCGTGGAGCACAAAGGCGCGCCGACCGTGATCCTGGCCAAGACGGTGAAGGGGTACGGCTTG
PROTEIN sequence
Length: 414
MEPQNKSRGTPWNERSPDNSRPELFETRKWLDSLEYVFEHILKHEESERTSLFLDELIERLRDSGVKIPYAVNTPYLNTIPAEEEPPYPGNREIERRIKSFVRWNAMAMVVKANRLHNDIGGHISTFASCATLYEVGFNHFFRGGDGGSPADMVYFQGHASPGNYSRAYVEWRMNAPRLHRFRQELADGGGVSSYPHPYLMPDFWQFPSVSMGLAPIMSIYQARFNRYLQARGFSTGEEPRVWCFVGDGEMDEPESSGALTLASRENLDNLTWVVNCNLQRLDGPVRGNGKIIQELEALFRGAGWNVIKVIWGSDWDPLLQADHKGLLLKRMEEAVDGDYQKYSVEPGSYTRKHFFGKYPELLEMVNHLTDDQIHKLLRGGHDPKKVYAAYKAAVEHKGAPTVILAKTVKGYGL