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PLM3-1_170_b1_sep16_scaffold_3650_6

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 4711..5298

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Nitrolancetus hollandicus Lb RepID=I4ED10_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 175.0
  • Bit_score: 164
  • Evalue 9.90e-38
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCF82572.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 175.0
  • Bit_score: 164
  • Evalue 1.40e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 179.0
  • Bit_score: 157
  • Evalue 2.00e-36

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 588
ATGGAGTCAGTCCTGTCGGACGTGGATTGCCTGGCGCGCTCGCTGAGCGAGCCGAAGGAGTTCGAGCCGATATTCGATCGGCACTTCCGTGCCGTCCACACGTACCTCCATCGCCGCGCCGGACGCGATGTCGCCGACGAGCTGGCCGCGGAGACGTTCGCGCTCGCCTTCGAGCGGCGCGCGAGCTGCCGCGGAACAGGAAGTGCGCTGCCTTGGCTGTACGGGATCGCGACGAACCTGCTCCGTCGCAGCCGGCGGACCGAGCGGCGTCAATTGCGGGCGTACGGTCGCACCGGAGTCGACCGCTGGGCCGCCTACGACGAAGAGGCGGACGCTCGAGCTGACAGCTCCTCCCTCGACGCGCGGCTGGCGAGTGCTCTCGCGGCGATGCGCCCTCGGGAGCGCGATGCGCTGCTCCTCTATGCGCTCGCCGACCTCAGCTACGAGGAGATCGCGTCCGCGCTCGACGTTCCGGTCGGGACGGTGCGCACGTGGCTCCACCGGGCGCGCAAGGTCGGACAACGCGAGCTCGCGGCGAAGCCGGACGCTCTCCCTCTCGCGACTACAGGAGCTGATTTGAATGGATGA
PROTEIN sequence
Length: 196
MESVLSDVDCLARSLSEPKEFEPIFDRHFRAVHTYLHRRAGRDVADELAAETFALAFERRASCRGTGSALPWLYGIATNLLRRSRRTERRQLRAYGRTGVDRWAAYDEEADARADSSSLDARLASALAAMRPRERDALLLYALADLSYEEIASALDVPVGTVRTWLHRARKVGQRELAAKPDALPLATTGADLNG*