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PLM3-1_170_b1_sep16_scaffold_5823_7

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 5332..5919

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Nitrolancetus hollandicus Lb RepID=I4ED10_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 197.0
  • Bit_score: 169
  • Evalue 1.80e-39
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCF82572.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 197.0
  • Bit_score: 169
  • Evalue 2.50e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 180.0
  • Bit_score: 164
  • Evalue 1.60e-38

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 588
ATGGAGCAAGTTCTGTCGGACGCGGATTGCGTGGCGCGCTCGCTGAGTGAGCCGAAAGCGTTCGAGCCGATCTTCGATCGGCACTTCGTTGCCGTGCACAGGTACCTCCATCGACGTGCTGGACGTGATCTCGCCGACGAGCTGGCAGCAGAGACGTTCGCGCTCGCCTTCGAGCGGCGCGCGAGCTGTCGCGCAAGCCGCAGCGCCCTGCCGTGGCTGTACGGGATCGCGACGAACCTGCTCCGTCGCAGCCGGCGGACCGAGCGCCGTCAACTGCGCGCCTACGGGCGCAGCGGAGTCGACTCGTCGGTCGCCTACGAGGACGAGCCGGCCGCACGAGTCGACGGCTCGGCTCTTGACGCTCGGCTGGCACGTGCTCTCGCGGCGATGCGCCCGCGGGAGCGCGATGCGCTGCTCCTCTACGCGCTCGCCGACCTCAGCTACGAGGAGATCGCCTCTGCACTCGACGTTCCGGTCGGGACGGTACGCACGTGGCTCCATCGGGCGCGTGAGGTCGGACGACGCGAGCTCGCGGCGGAGATGGACGCTTTCCCTCTCGCGACTTCAGGAGCTGATCTGAATGGATGA
PROTEIN sequence
Length: 196
MEQVLSDADCVARSLSEPKAFEPIFDRHFVAVHRYLHRRAGRDLADELAAETFALAFERRASCRASRSALPWLYGIATNLLRRSRRTERRQLRAYGRSGVDSSVAYEDEPAARVDGSALDARLARALAAMRPRERDALLLYALADLSYEEIASALDVPVGTVRTWLHRAREVGRRELAAEMDAFPLATSGADLNG*