ggKbase home page

PLM3-1_170_b1_sep16_scaffold_5417_5

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(5135..5776)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6S1_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 204.0
  • Bit_score: 171
  • Evalue 5.20e-40
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 204.0
  • Bit_score: 171
  • Evalue 1.50e-40
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 213.0
  • Bit_score: 360
  • Evalue 1.10e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGCCCGAGACGATCCTCATCGTCGATGACCATCCGCTGACGAGAGACGCCCTGTCGGCTCTCCTCACCCAGCAGGGCTTCGAGGTCGTAGGTGCGGCAGCGAGCGGCGAGGAGGCGATCGCGGAGGCGGTGGACCTCCAGCCCGACCTCGTCCTCCTCGACCTCACGATGCCTGGGATGGACGGGCTGACGGCCCTCCCGAGAATCCGAGAGGAGGCGCCGGACTCGGAAGTCGTCGTCCTCACGGCCTCGGACGCGGAAGAGAACCTCCTCGCGGCGATTCGCGCCGGCGCGTCCGGCTACCTCCTGAAGACGGAACCGCCCGAGCAGATCGCCGCCTTCCTCCGCGGTGTCGCACGTGGGGACGCGGCGCTTTCGGGCGGCGTGGCGAGACGTCTCCTCGACCGGGTCAGGGCGGGTGGCCGGCTCGACGGGATCCCGGAGGCGATCACGCGCGTCCTCTCCGCACGCGAGGTCGAAGTCCTGCTCCTCCTCGACGAGCATCTGGGCACAGACGAGATCGCGCAGCGCCTCTTCATCTCGGAGCACACGGTCCGCTCGCACGTGAAGAACCTCCTCAAGAAGCTCGGCGTCTCCTCGCGCCGCGAAGCACTCGAGCGGCTCGACACAGCACGAAGCTAG
PROTEIN sequence
Length: 214
VPETILIVDDHPLTRDALSALLTQQGFEVVGAAASGEEAIAEAVDLQPDLVLLDLTMPGMDGLTALPRIREEAPDSEVVVLTASDAEENLLAAIRAGASGYLLKTEPPEQIAAFLRGVARGDAALSGGVARRLLDRVRAGGRLDGIPEAITRVLSAREVEVLLLLDEHLGTDEIAQRLFISEHTVRSHVKNLLKKLGVSSRREALERLDTARS*