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PLM3-1_170_b1_sep16_scaffold_8411_1

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 2..541

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 179.0
  • Bit_score: 238
  • Evalue 2.90e-60
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 179.0
  • Bit_score: 238
  • Evalue 8.20e-61
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 334
  • Evalue 9.30e-89

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
TGGTGGATCCGCCAAGCGGTGGCGCGAGCGATCGCGGACAAGGGGCGGACGATCCGGATGCCCGTCCACGTCGTCGAGAAGCTGAACCGGATCCTCCGCTCCGAGCGCAAGCTCCGCGCAGAGCGCGGTCGCGAGCCGTTGGTCGACGAGATCGCGCGCGACCTCGACATGACGCCCGACGAGGTCGCGCACATCAGGCGCAGCGCCCAGACTCCGGTCTCGCTCGAGAAGCCGGTCGGCGACGACGACGAGTCCGAGTTCGGGCATTTCCTGGCCGACGACTCGACGCCGCTCCCGGACGAGCTCGCGGAGATAGCTCTCCAGCGCGAAGCCCTGCGCACCATCCTCAGTGCGCTCTCCGAGCGGGAGCGCCGTGTGCTCGAGCTCCGGTACGGGCTCGACGGCCAGCAGCCGCGGACGCTCGACGAGGTCGGCCGCGCGTTCAACGTCACGCGGGAGCGCATCCGCCAGATCGAGCACCAGGGACTGAAGAAGCTCCGCGCGCTCGCGGACGCTCAGCGCGTAAGAGACGTAGCCTAG
PROTEIN sequence
Length: 180
WWIRQAVARAIADKGRTIRMPVHVVEKLNRILRSERKLRAERGREPLVDEIARDLDMTPDEVAHIRRSAQTPVSLEKPVGDDDESEFGHFLADDSTPLPDELAEIALQREALRTILSALSERERRVLELRYGLDGQQPRTLDEVGRAFNVTRERIRQIEHQGLKKLRALADAQRVRDVA*