ggKbase home page

PLM3-1_170_b1_sep16_scaffold_9220_1

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(2..481)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIJ9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 157.0
  • Bit_score: 149
  • Evalue 2.10e-33
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 157.0
  • Bit_score: 149
  • Evalue 5.90e-34
PAS domain S-box {ECO:0000313|EMBL:AGA28643.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 157.0
  • Bit_score: 149
  • Evalue 2.90e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 480
GTGTTCAGAAAGCGGCAAACGAGCCCAGAGACCGGTACGGCGCTGCGCGGGGAAGAGGCGCATGCCCTGGCGATCCTGCATGCGGGGCTCGATGCGCTGATCACGATCGATCACCTTGGCCGGGTGCTGGAGTTCAACCGGGCTGCCGAGGAGACATTCGGCTATCCAAGGGAGAACGTTCTCGGGCGGGAGCTCGCCGAGCTCGTCGTACCGCCCGAGCTCCGCGAGGCGCATCGACAGGCGCTTGCGCGGTGGACGGCCGCGGGGCCCACTGCGAGGGCAGGCGGGCTGCTCGGTCGCCGCATCGAGGTGCAGGCGATGCGGTCCGGCGGCTCCGAGTTCCCGGCCGAGCTGGCGATCAGCCGCGTCGACGTTCCGGGTCCCCCGCTCTTCACGGCCTGCATTCGCGACGTCAGCGAACGGAAGAACACCGAGGACCGCCTACGGGACGCTGAGTTCCGATTCCGAACGCTCGTGGAG
PROTEIN sequence
Length: 160
VFRKRQTSPETGTALRGEEAHALAILHAGLDALITIDHLGRVLEFNRAAEETFGYPRENVLGRELAELVVPPELREAHRQALARWTAAGPTARAGGLLGRRIEVQAMRSGGSEFPAELAISRVDVPGPPLFTACIRDVSERKNTEDRLRDAEFRFRTLVE