ggKbase home page

PLM3-1_170_b1_sep16_scaffold_11382_2

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(1137..2003)

Top 3 Functional Annotations

Value Algorithm Source
glycoside hydrolase Tax=Saccharopolyspora spinosa RepID=UPI000237A86A similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 208.0
  • Bit_score: 164
  • Evalue 8.60e-38
lysozyme similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 203.0
  • Bit_score: 157
  • Evalue 3.90e-36
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 204.0
  • Bit_score: 166
  • Evalue 5.40e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 867
ATGATCAAAGGCATCGACGTCTCGAGCCACCAAGGGCGGATCGATTGGCAGCGCGTCAAAGCCGACGGCATCAGTTTTGTGTTGATCAAGGCGACCGAGGGTGTCGGCTTCGTCGACCCGAAGCTGAGCCACAACGCCGAGGGAGCCCGGGCGGTCGGGCTCCCGTGCGGCTTCTACCACTTCGCTCGCCCCGACACCCAGAGTGGGAGAACGGTCGAGTCGGCGATCGGCGACGCCCGCGCCGAGGCGGACTCTCTCCTCGCCGTCGCCTTCCCGAAGAGCGGCGACCTTCTTCCCGTCCTCGATCTCGAGACAGCCGGCCTTCCAACCGCTCGTCTGTTCGCATGGACGAAGGCATGGCTCGAGCGGGTGACCGAGCGTATCGGCGCGAAGCCCATCCTGTACACGTTCCCGGCCTTCTGGGCCAAGATGGGGAACCCGACCGAGCTCGGCTCGTATTCCCTCTGGATCGCACACTGGAGAGTCTCCGCGCCGACGCTCCCCGCAGGCTGGCGCCGGCACACGATCTGGCAATACGCAGACGACGGGAGCGTGGACGGCATCACCGGCAACGTCGACCTCAACCGTCTTCACGAGCGGGCAACGCTCACCGATATCACCTATCAGTCGAGCGAGGTGACGACGATGCCACCGCCGCGGCCACGGCAGAACCTGCCCGGCCCGGTGCCGAAGCCGGCATGGTTCGGGCCCTGGCTCCGCTGGCAGCTCGGCGTCGGTGAGTTCGAGGGGCTGGCGCAGAACCCCTCTGTACGCCCCGACGAGGCGCCGCTCGAGGTACCCGGCTGGGCCTTGGCCTGCGAGAAGAAGCTGCGGGCTGCGCGCGCGGCCCGTCTGGGAGTCCGGTGA
PROTEIN sequence
Length: 289
MIKGIDVSSHQGRIDWQRVKADGISFVLIKATEGVGFVDPKLSHNAEGARAVGLPCGFYHFARPDTQSGRTVESAIGDARAEADSLLAVAFPKSGDLLPVLDLETAGLPTARLFAWTKAWLERVTERIGAKPILYTFPAFWAKMGNPTELGSYSLWIAHWRVSAPTLPAGWRRHTIWQYADDGSVDGITGNVDLNRLHERATLTDITYQSSEVTTMPPPRPRQNLPGPVPKPAWFGPWLRWQLGVGEFEGLAQNPSVRPDEAPLEVPGWALACEKKLRAARAARLGVR*