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PLM3-1_170_b1_sep16_scaffold_12956_3

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(1852..3126)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 459.0
  • Bit_score: 264
  • Evalue 2.10e-67
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Frankia sp. BCU110501 RepID=UPI0003776357 similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 459.0
  • Bit_score: 266
  • Evalue 4.00e-68
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 459.0
  • Bit_score: 264
  • Evalue 4.30e-68

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
GTGATTGCGGTTGCCTGGGACGAGCTCGACGCCTTGGGGCTCGGCCGGCTCGAGGGCGGTGCCGCCGGCACGTCAGTCACCGGGATCAAGGCCGACTCGCGCGAGGTCGGTCCCGGCGACCTCTTCGTCGCGCTCTCGACCGGCGTCCGCTACGTGGGCGAGGCTCGCGCTCGCGGTGCGGCGACCCTCGTGCCGGAGGACCAGGAAGCAGCGCTCGCGGCTCTTGCCTCTCTCGTCCGTTCGAAGAGCGCCGCACGCGTGGTCGCCGTCGTCGGCTCTGCCGGAAAGACCTCGACCAAGGACGTCCTCGGAGCGCTCTGCGCGCCGCACGCTCCGACGGTCTGGGCGGATAGGAGCCTCAACAACGAGATCGGCCTGCCGCTGACCGTGTGCAGGCTCGAGCCGGACACCGCGATCCTCGTCACGGAGATGGGCATGCGCGGGCTCGGCCAGGTCGCCGAGCTCTGTGCGATCGCCCGTCCCGACCTCGTCGTCGTCTCGCACATCGGCCCGGAGCACCTCGAGCTGCTCGGAAGCATCGAGCGTGTCGCGGAGGCGAACGCCGAGGCGATCGCGGCGCTCCCGGCGGGAGGTACCGCCGTCGTGCCGGCGCGCTCCAGGGAGCTCGAGCCGTACCTCGGCCGCGACGACATCGCGCTGCGCCGCTTCGACCCAGACGACGTCGAGCTGACAGATGGCCGCGCCCGCTTTCGCATCGACGGCGACGTCGTCGAGCTGGATCTGCCCTTCACCCAGCGCCACCACGGCGTGAACGCGCTCGCCGCCTTGCACGCGTATGCGGCGCTCGGGCTTCCTCTCGATCGCGTCTCCGAGGGCGCCGCGCTGATCCAACTGTCCCCTTGGCGTGGAGAAGAGCTCGTCCTGCCGGGCGGCGGGTTCGTCATCAACGACGCGTACAACGCCAATCCCGACTCGATGCGCGCAGCGCTCGAGCACCTCGCCGAGCGCGCGGGAGATCGCCGGCGTGTCGCGGTTCTCGGCGAGATGGCCGAGCTCGGCGATTCCGCGGAGACCTACCACGTGCAGATCGGTGAGCTCGCGGAGGAGCTGGGCGTCGCGGTGATCGGGGTCGGGGGGCCGGCCCGCGCATACGGCCCCGCGGTCTGGGCGTCTGGCGTGGACGAGGTGGTGGAGGTGGCGCGCTCGTTCGTGCGGCCTGGCGACGCCGTACTCGTCAAGGCCTCGAGAGCGGTCGGGCTCGAAGGCATCGCCGCCGAGATCACGAACTTCGCCCGAGCATGGTCCCTGTCCTAA
PROTEIN sequence
Length: 425
VIAVAWDELDALGLGRLEGGAAGTSVTGIKADSREVGPGDLFVALSTGVRYVGEARARGAATLVPEDQEAALAALASLVRSKSAARVVAVVGSAGKTSTKDVLGALCAPHAPTVWADRSLNNEIGLPLTVCRLEPDTAILVTEMGMRGLGQVAELCAIARPDLVVVSHIGPEHLELLGSIERVAEANAEAIAALPAGGTAVVPARSRELEPYLGRDDIALRRFDPDDVELTDGRARFRIDGDVVELDLPFTQRHHGVNALAALHAYAALGLPLDRVSEGAALIQLSPWRGEELVLPGGGFVINDAYNANPDSMRAALEHLAERAGDRRRVAVLGEMAELGDSAETYHVQIGELAEELGVAVIGVGGPARAYGPAVWASGVDEVVEVARSFVRPGDAVLVKASRAVGLEGIAAEITNFARAWSLS*