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PLM3-1_170_b1_sep16_scaffold_17751_2

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(351..1466)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase with PAS/PAC and GAF sensors Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4F2_9GAMM bin=16ft_combo_ws3_JS1 species=Thiorhodospira sibirica genus=Thiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 303.0
  • Bit_score: 107
  • Evalue 1.60e-20
PAS/PAC sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 105
  • Evalue 1.70e-20
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 303.0
  • Bit_score: 107
  • Evalue 2.20e-20

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1116
ATGACGATCGCGATCTTCGCGGCGTCCGTCGCGCTGGGAGTCCTCTGCATCGGCCTGTTCCTTGTCGCGGTTCGACGCCTGCTCGGACGGCAGGAGGAGATCGTCACGGCCATGCTGCGGCGGTACGACGATCGCCTCGGGGAGTTCGCGCAGACGTTGAACGACGCGCTCAACCAGACGCTGCCGGCGCGGATATCTGCCGCGATCTCGGGGGCGCCGGCCGTCCCAGAGCTCAGCGATCATGGCGTGACGCGTTTGCTCGAGCTCGCGCGCGACCGAACCGACTCCGACGCTGCGATCGCCGTCGTCGGCAACCAGAAGAGCGAGCCCGTACTCGCGACCGTCGGCCTCTCCGATGCCGAGGCGGCACAGGTCGGAAGCATCGGTGTCCCCGACTATCGGGGAGCGCGGGCGATACAGGTCTCGTTCAGCGGCGACGCGGAGGCGCGTACGGGCAGCACCCCAATCCGCGCCGGACTCGTCGTCCCGCTGCTCGATCCCCCACACGAGCCAGGCATGCTCGCCGTGCTGACTCGTGCGCCCGACAGGCAGTTCAGCGAGGTCGACATCACGACACTCGAGGACGTGCTCAGCGGCACGCGCCCGTCACTCGAGACATCCCTCGAGCTGCGCGAGCCCGACCCGGTTCCCGAGCGCGATCCTTTGACGTCTCTCTACGACCGCCCGGCGTTCCACTCTTTGCTCGAGCGCGAGATCGCCCGAGCGCGGAGAGCCGGCGAGCCGCTCGCGTTGCTGATGCTCGACGTCGACCGCTTGACGACGCTGAACGCCCGGATCGGCCTCGCCCAGATCGCCGAGCTGTTGAGCGACGTCTCGGGCCCCAGAGATCTTCCGTGCAGGATCGGAGGCGGACGCTTCGGCGTCCTCGTCTCGTACGGCGACATCCGCGACGCCGAGCGTCTGTTCGAGCGGCTCCAGGCGGCCCTGCACGAACACCCATTCGCCGACGTCGGGGTCGTCACGCTCTCGGGCGGAGTCGCCGAGCTGCTGCCGACCGACGACGCGATCGCTCTGGTCGTCCGCGTGGATGCTGCGCTCGGGCTCGCAAAGGGCTCGGGCCGCGACACGCTGGTCACCGCCGCGCGGCGCCAATAG
PROTEIN sequence
Length: 372
MTIAIFAASVALGVLCIGLFLVAVRRLLGRQEEIVTAMLRRYDDRLGEFAQTLNDALNQTLPARISAAISGAPAVPELSDHGVTRLLELARDRTDSDAAIAVVGNQKSEPVLATVGLSDAEAAQVGSIGVPDYRGARAIQVSFSGDAEARTGSTPIRAGLVVPLLDPPHEPGMLAVLTRAPDRQFSEVDITTLEDVLSGTRPSLETSLELREPDPVPERDPLTSLYDRPAFHSLLEREIARARRAGEPLALLMLDVDRLTTLNARIGLAQIAELLSDVSGPRDLPCRIGGGRFGVLVSYGDIRDAERLFERLQAALHEHPFADVGVVTLSGGVAELLPTDDAIALVVRVDAALGLAKGSGRDTLVTAARRQ*