ggKbase home page

PLM3-1_170_b1_sep16_scaffold_23166_4

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 3423..3965

Top 3 Functional Annotations

Value Algorithm Source
beta-lactamase Tax=Herbaspirillum seropedicae RepID=UPI00030DE305 similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 181.0
  • Bit_score: 206
  • Evalue 1.60e-50
Beta-lactamase class A {ECO:0000313|EMBL:EJN02908.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 177.0
  • Bit_score: 197
  • Evalue 1.00e-47
putative beta-lactamase protein similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 179.0
  • Bit_score: 189
  • Evalue 5.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGATGATGATCGTCAGCGACAATACGTGCACCGGAATGGTCGTCGACCTCGTCGGACTCGCGCAGATCCAGCGCTACTGCGAAGCGCTCGGCATGAAGGGCACGGTCCACCGCTTCGGGATTCCGCCGCGCCTCGGGCGCGACCACACGCTCGCGCAGGTCACCACGACCACGCCGAACGACCAGGGTCTCCTGCTGGAGCTGATCCTGAATGGGGCGGGGGACGCGACGGTCGCGGCGCGTCTCGGATGCACGCCGGAGCTGTGCCGGCTCGCGCTCGACGTCCTCTCGTGGCAGAAGCTCAAGACCCGCCTGCCGTCGCGCCTGCCGGTCGGCACGAAGGTCGCCCACAAGACGGGGACCGGCTCGCGCGGCTTCATGGACGCCGGGATCGTCTTCAAGAACGACCGGCCGCTCTTCATCCTGACGGCCTACACCGAGCACGTGCCGGAGACGCTGGCCGACTCCACCCCCGGCTTCACGGCCGCCTACGAGCTGATCGGACGCATGGCCCGTCTAGCCTGGGACCGTTTCGGATCGTGA
PROTEIN sequence
Length: 181
MMMIVSDNTCTGMVVDLVGLAQIQRYCEALGMKGTVHRFGIPPRLGRDHTLAQVTTTTPNDQGLLLELILNGAGDATVAARLGCTPELCRLALDVLSWQKLKTRLPSRLPVGTKVAHKTGTGSRGFMDAGIVFKNDRPLFILTAYTEHVPETLADSTPGFTAAYELIGRMARLAWDRFGS*