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PLM3-1_170_b1_sep16_scaffold_25867_3

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(1897..2727)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MG96_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 264.0
  • Bit_score: 285
  • Evalue 5.50e-74
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 264.0
  • Bit_score: 285
  • Evalue 1.50e-74
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 276.0
  • Bit_score: 479
  • Evalue 2.10e-132

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 831
GCTGGACCGAACGCCGACGATCCGCTGAAGCTGTACGTCCGCCAGATCGGAGACGGCCGTCTGCTCACGGCGGGCGAGGAGCGCGAGCTGGCCCGACTCAAGGACGCGGGCGACGATGCCGCCAAGCGCCGCATGATCGAGTCGAACTTGCGGCTCGTCATGTCGATCACCCGGAACTACACGCGCGCGGACGTTCCGTTGCTCGACCTCATCCAGGAGGGGAACCTCGGGCTCATCCGGGCGGTCGAGAAGTTCGACTACAAGCTGGGCTTCAAGCTCTCGACCTACGCGACCTGGTGGATCAAGCAGGCCATCTCCCGCGCGCTGGCGGAGCAGGGGCGAACCATCCGTCTGCCGGTGCACGTCGCGGACCAGGTGCGCCGGGTCACCAAGGCTCGTCGCCTGCTCGGGCAGAAGCTGAACCGCGATCCCTCGCTCGACGAGATCGCCGTCGAGATCGGCGTCACCCCGGAGCGTGTGCAGGAGCTGCTCGAGCTCGTACAGGATCCCGTCAGCCTGGAGATGCCGATCGGGGACGGCGACTCGAGTGTCGCCGACCTGATCCCCGACACGAGCGCCGACCAGCCCGAGGCCGAGACCGCCGATCGTGCACGATCATCCGAGCTGGTCGACGCGCTTGCGAAGCTCCAGCCACGACAGCGCCGTGTCGTCATCGAGCGCTTCGGCCTCGACGGGGTACGACCGAGGACGCTCGAGGAGGTCGGGGCGAACCTCGGAATCACGCGCGAACGGGTTCGGCAGCTGGAGGCACGCGCGCTACGCGAGCTCCGCGCGGTTGCCCCTGGTCTCGAGCTCTACCTCCGCTCATAG
PROTEIN sequence
Length: 277
AGPNADDPLKLYVRQIGDGRLLTAGEERELARLKDAGDDAAKRRMIESNLRLVMSITRNYTRADVPLLDLIQEGNLGLIRAVEKFDYKLGFKLSTYATWWIKQAISRALAEQGRTIRLPVHVADQVRRVTKARRLLGQKLNRDPSLDEIAVEIGVTPERVQELLELVQDPVSLEMPIGDGDSSVADLIPDTSADQPEAETADRARSSELVDALAKLQPRQRRVVIERFGLDGVRPRTLEEVGANLGITRERVRQLEARALRELRAVAPGLELYLRS*