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PLM3-1_170_b1_sep16_scaffold_29598_5

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 1971..2528

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Corynebacterium callunae DSM 20147 RepID=M1UXT6_9CORY similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 162.0
  • Bit_score: 144
  • Evalue 7.70e-32
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 144
  • Evalue 2.20e-32
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 180.0
  • Bit_score: 315
  • Evalue 3.60e-83

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGGTACGGTAGTCCGGATGAGCGAGCCCGAGCCGGCCACCGAAGCGCGACGAATCGCCGCACAAGCCCGCGATCGTGCCCGCTTCGAAGAGGAGGCTCTTGCGCTCGCCGACCAGGTCTACCGGGTTGCGAGGCGACTGGTCGGCTCGCGTGAGGAGGCAGAGGACTTGGTGCAGGAGACGTACGCGAGGGCCTTCCGGAGCTGGCGCTCTTTCACTCCCGGTACGAACATGCGGGCCTGGCTCCTTCGCATCCTCACGAACCTGAACGTCGACCGCGGCCGCCGGATCCAGCGCACTCCACCGACGCAGTCGCTCGAGGAGACCGATTACTTCCTTGCGAACAAGGTCGCCTCGGCGGCGGGCGAGGAGGCGCTCGAGCACGAGCTCGTCGTCGAGCGCTTGTCGCAAGATTCCGTCGTGCAGGCGCTCTCGGAGATCCAGCCGCAGTTCCGGGAGGTCGTGGTGCTGGTCGACATCGGTGACTTCACCTACGCCGACGCGGCACAGATCCTCGATATCCCGATCGGCACGGTGATGTCTCGCCTCCACCGGGGG
PROTEIN sequence
Length: 186
MGTVVRMSEPEPATEARRIAAQARDRARFEEEALALADQVYRVARRLVGSREEAEDLVQETYARAFRSWRSFTPGTNMRAWLLRILTNLNVDRGRRIQRTPPTQSLEETDYFLANKVASAAGEEALEHELVVERLSQDSVVQALSEIQPQFREVVVLVDIGDFTYADAAQILDIPIGTVMSRLHRG