ggKbase home page

PLM3-1_170_b1_sep16_scaffold_79954_1

Organism: PLM6_170_b1_sep16_Actinobacteria_69_15

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: comp(3..1256)

Top 3 Functional Annotations

Value Algorithm Source
Multimodular transpeptidase-transglycosylase Tax=Patulibacter medicamentivorans RepID=H0E260_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 416.0
  • Bit_score: 342
  • Evalue 5.70e-91
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 447.0
  • Bit_score: 318
  • Evalue 1.50e-84
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 350.0
  • Bit_score: 587
  • Evalue 1.10e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
TTGCGGGTTCGGAGAGAGAAGGGGACGCCGTCGCGAGGGCGCCGGGTTCGCAAGCTGCGCCTGGCGACGCTTCTCAGCGTCCTTCTCGTCCTTGTCGGGCTGTCCTTCACGTTCGGGCTCGTGCGAGCGGTCGGGAGCGAGATCGGGTCGCTCGACCCTGCCGCCCAACGCTCGGACGTCGACACGGTGATCTACGCGTCGAACGGCCGCAGGGTGCTGGCGGTGCTTCGAGGCGAGGAGAGCCGCGTCCTCGTCGATACCGAAGACATCGCCCCGATCATGCGCCAGGCGATCGTCTCGACCGAGGACCAGCGCTTCTTCGAGCACGACGGGATCGATCTCCGCGGCGTCGGGCGCGCCCTCTTGGCGGACGTGCGGAACCAGGCGCTCGTCGAGGGCGGCTCGACGATCACGCAGCAGTTCGTAAAGAACGCGTACATCCGCAACGAGCGCACGATCGCGCGCAAGGTGCGCGAGGCCGCTCTCGCCTGGCAGCTTGAACAGGACTGGACGAAGGATCGGATCCTCACCGCCTATCTGAACACGATCTACTTCGGGAACGGCGCGTACGGGATCCAGCAGGCCTCCAAGACGTACTTCGGAAAGGGCGCCAAGTACCTCGAGCTCCACGAGGCCACCCTGCTCGCAGGCATTCCGGCCGACCCCGCACGCTACGACCCGGTGACGAACCCGTCGAGCGCCGAGCAGCGCCGGAAGCACGTCCTCGCGGCGATGTTCGAGCAGGGCAAGATCACGCGCCGCGATTTCGAGCGCGCGAACGCGAAGCCGCTGCCGGAGCCGGACACGGTCCGTCTCCCGGGGAGAGTCGGACCGGCCCAGTACTTCGTCAACTACGTCAAGGATCAGCTGGTCGAGAAGTACGGAGCGGGACGCGTTTTCGGCGGCGGTCTGAAGGTGACGACGACGATCGACCTCGAGCTGCAGGCGCAGGCGCGCGCGGCGATCGAGAAGGTGCTACGGAGTCCGGATGGCCCCGCCGCTGCGCTCGTCGCCATCGACCCGAGCACCGGTGCCGTCAAGGCGATGTTCGGCGGCAGGAACTTCCGCGAGAGCCAGTTCAACCTGGCCGCACAGGCAGAGCGGCAACCGGGGTCGGCGTTCAAGCCGATCGTTCTCGCGACGGCCATGCGTGCAGGGCTGTCGCCCACGACCGAGATCGAGTCGAAGAAGGTCTCGATCGACGCCGGCGACCGCATCTGGACGGTGACGAACTACGACGACACGTACCTCGGG
PROTEIN sequence
Length: 418
LRVRREKGTPSRGRRVRKLRLATLLSVLLVLVGLSFTFGLVRAVGSEIGSLDPAAQRSDVDTVIYASNGRRVLAVLRGEESRVLVDTEDIAPIMRQAIVSTEDQRFFEHDGIDLRGVGRALLADVRNQALVEGGSTITQQFVKNAYIRNERTIARKVREAALAWQLEQDWTKDRILTAYLNTIYFGNGAYGIQQASKTYFGKGAKYLELHEATLLAGIPADPARYDPVTNPSSAEQRRKHVLAAMFEQGKITRRDFERANAKPLPEPDTVRLPGRVGPAQYFVNYVKDQLVEKYGAGRVFGGGLKVTTTIDLELQAQARAAIEKVLRSPDGPAAALVAIDPSTGAVKAMFGGRNFRESQFNLAAQAERQPGSAFKPIVLATAMRAGLSPTTEIESKKVSIDAGDRIWTVTNYDDTYLG