ggKbase home page

PLM3-1_170_b1_sep16_scaffold_36641_1

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67SW7_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 139.0
  • Bit_score: 141
  • Evalue 4.90e-31
Uncharacterized protein {ECO:0000313|EMBL:KKL89096.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 140.0
  • Bit_score: 209
  • Evalue 2.70e-51
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 139.0
  • Bit_score: 141
  • Evalue 1.40e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 420
TTGGATTTCGGCCAGGTAGAAGCCTTCTCACAGGTCTCCACGCATCACTCCTTTAGCAGCGCTGCCGAAGCGCTCCAGCTCACCCAGCCATCAATCACCGCGCGCATTCAGAGCCTGGAGCGCGAGCTGGGTGAGGAGCTGTTCGAGCGCGGCAGCCGCGGCGTCAAGCTCACCGACGCCGGAAGGGCCTTCCTGCCTTATGTCGAGCGACTCCTCCAGACGCTCCGCGAGGGGCGCGACGCCGTCGGCGAGGTGCGGCAGGGGCAGAAGGGCACGCTCCGCCTGGGCTCGGCGCCCACGATCTCAACGTACGTACTTCCCCGCATTCTCAACGCCTTCTGCCGCCAGTACTCCGGTGTCGACGTCATCATTCGCACCGGACGCTCCGAGCAAGTGCTGAGCATGCTCCTTGCTGACGAC
PROTEIN sequence
Length: 140
LDFGQVEAFSQVSTHHSFSSAAEALQLTQPSITARIQSLERELGEELFERGSRGVKLTDAGRAFLPYVERLLQTLREGRDAVGEVRQGQKGTLRLGSAPTISTYVLPRILNAFCRQYSGVDVIIRTGRSEQVLSMLLADD