ggKbase home page

PLM3-1_170_b2_sep16_scaffold_102_82

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: 56272..56493

Top 3 Functional Annotations

Value Algorithm Source
transcription factor CBF/NF-Y/histone domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 73.0
  • Bit_score: 117
  • Evalue 3.00e-24
hmfA; DNA-binding protein HMf-1 similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 73.0
  • Bit_score: 115
  • Evalue 4.30e-24
Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 73.0
  • Bit_score: 117
  • Evalue 4.30e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 222
ATGACAGCCTCGGAATTCGGTCTTTCTGCAATGTATCGTATTTTAAAAAAATCAGGTGCAGAAAGAGTAAGTGATGAATCTGCAGATGAATTGAGGAGGATATTGGAAGAAATCGGTACTGCCATAGCCAAAAGTGCAGTAGATATGTCGATTCATGCGGGAAGAAAGACAGTCAAAGCAGAAGATGTCAGATTGGCTGCAAAACCATTTGCAAAATTCTAA
PROTEIN sequence
Length: 74
MTASEFGLSAMYRILKKSGAERVSDESADELRRILEEIGTAIAKSAVDMSIHAGRKTVKAEDVRLAAKPFAKF*