ggKbase home page

PLM3-1_170_b2_sep16_scaffold_24_77

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: comp(69400..69915)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E Tax=Thaumarchaeota archaeon N4 RepID=V6AQW9_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 1.60e-71
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 2.20e-71
tfe; Transcription factor E similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 169.0
  • Bit_score: 266
  • Evalue 2.70e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thaumarchaeota archaeon N4 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 516
ATGACAATGACAAATAGTCATGAAGATCCTTTTGTAAAAATAGCAGCTTTGATTGGCGGGGACGAATATCTTAAAGTTACTCGCTCGCTTTTAAATACAGAAGATGCTACTGACGAAGAAATTGCAAGCTCTACTGGTCTAAGAATAAACATAGTAAGAAAAGTGTTATACGATCTTTTTGGAAAGGCTCTGATTACAGGCATTAGAGTAAAAGATGAGAAAAAAGGTTGGTTTGTTTATCGATGGCGTGCACGAAGGGATGAGGTAGATAACTTCATAGGAAACCAAAAAAAGAAAATTACTGAAAGGCTACAACAAAGATTAGATTATGAAAGTTCTGCTGAGTTTTATCATTGTGGAAATGAAGATTGTACAAAACTTACATTTGAGAAGGCTTTGGATTTGTCTTTCAAATGTCCCACTTGTGGAAAGCTTGTGAATATAATAAAAAATGATAAACTCAAGAAGGCACTTCAGTATAAAATTGATGAGTTACATGAAGATCTAAAACACTAA
PROTEIN sequence
Length: 172
MTMTNSHEDPFVKIAALIGGDEYLKVTRSLLNTEDATDEEIASSTGLRINIVRKVLYDLFGKALITGIRVKDEKKGWFVYRWRARRDEVDNFIGNQKKKITERLQQRLDYESSAEFYHCGNEDCTKLTFEKALDLSFKCPTCGKLVNIIKNDKLKKALQYKIDELHEDLKH*