ggKbase home page

PLM3-1_170_b2_sep16_scaffold_13557_7

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 5759..6421

Top 3 Functional Annotations

Value Algorithm Source
pilus retraction protein PilT; K02669 twitching motility protein PilT bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 202.0
  • Bit_score: 328
  • Evalue 4.50e-87
pilus retraction protein PilT similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 194.0
  • Bit_score: 169
  • Evalue 7.50e-40
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 202.0
  • Bit_score: 328
  • Evalue 6.30e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 663
ATGACGCCACTCTCTCTGGAACGTGATGTCATCCTCCGACGCTCGGTCGAGCTCGGCGCCTCCGACCTGATCCTCACGACCGGCCATCCGGTCATGATCACGGTGGCGGGCGTGCTCCAGCCGATGCCTGACTCCACGGTGCTCACCGACGTCGATTCCCGGCGGTTGTCCGAGAGCTTCCTTACACCGGCTCTCCACGAGCGGTTCCTCCGCGATCTCGAGCTCGACACCCGCTTCTTCCTGCCGGGAGTCGCCCACTTCCGCATCAACCTCTTCATCCAGCGCGGTCATTGGAGTGCGGCGGTACGTATCATCCCGCTCAAGATCCCGCTTCCGACCGAGATCGGCCTCCAGCCGCACGTGGTGTCGCACCTGCTGGGCCTGACGCGTGGCTTGGTTTTGATCACCGGTCCTACCGGGTCCGGCAAATCCACGACCATTGCTTCGCTGCTCGAGCAGGTGAACCAGGGCGGGTCCCGGCGCCACATCGTGACGGTCGAAGATCCGATCGAATTCATGTTCGAGGCCAAGAACGCGGTGATCGACCAGCGCGAGGTCGGAACCGACACTAAGAGCTATTCGCGCGGATTGCGCGGCGCGCTGCGCGGGACCTGTCGAGCATGGCGATCGCCCTCACCGCCGCCGAGACGGGCAACCTCGTGA
PROTEIN sequence
Length: 221
MTPLSLERDVILRRSVELGASDLILTTGHPVMITVAGVLQPMPDSTVLTDVDSRRLSESFLTPALHERFLRDLELDTRFFLPGVAHFRINLFIQRGHWSAAVRIIPLKIPLPTEIGLQPHVVSHLLGLTRGLVLITGPTGSGKSTTIASLLEQVNQGGSRRHIVTVEDPIEFMFEAKNAVIDQREVGTDTKSYSRGLRGALRGTCRAWRSPSPPPRRATS*