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PLM3-1_170_b2_sep16_scaffold_1574_22

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: 15122..15916

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL40_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 264.0
  • Bit_score: 463
  • Evalue 8.20e-128
ecr; exosome complex RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 264.0
  • Bit_score: 463
  • Evalue 2.30e-128
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 264.0
  • Bit_score: 463
  • Evalue 1.10e-127

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 795
ATGCACGATGTCAAGAGAAGATACGTAATCCCTGGCGACAAAATCGCTGAAGGTAATTTTAGGCCGCTGATGAATGTAGTCAAATCCGGCAGCACGCTTACTGCGACTAGAATTGGCATTGCAGAGACAGGTCGCGATGGAGTCAAGGTCATACCATTATCCGGAGTGTACATCCCGCGCGTCAACGATCTGGTCATTGGCAAGATAGTCGATCACTCTTCGCTTTCCTGGGAAGTTGACATTAACTCGTGCTTTTCTGCACACCTGCCGGCTCAGGATGTCTTTGGCCGCGACTTCACGCCAGCAAGGGATGACATGAGCAAGCACTTTGCAATAGGCGACATGATTACCGCAAGAATAATGGCGTTCGATAGGACACGCGACCCTATGCTCACTGTGCAGGACAGAGATCTCGGCAAAATTGAAAGGGGAGAATTGCTTATGATATCGGCCACACGAGTTCCGCGGCTGATAGGAAAGAGAGGCTCTATGATCCAGATGATAGAGCAGGCAACTCAAACCCGCGTTCTTATAGGTCAGAACGGCATTGTTGTGGTGACAGGCAGAAATCCGGAAGGAATAAAACTGGCAGTTCGGGCAATCAAGATGGTTGAAGAAGAAGCCCATACCGCCAACCTGACGCAGCGAATAAAGGTGCTGCTGAACGTCCCTGATACCCCGCCGCAGCAGGAGGTGTCGCGTGCGCCTGTTGGTACTGGCTCTGACAAACCGCAAGAAATCGAATCCACCATAGACGAAGTGGAAGAGGAACTGGAAGTTGAAGGAGAAAAATAA
PROTEIN sequence
Length: 265
MHDVKRRYVIPGDKIAEGNFRPLMNVVKSGSTLTATRIGIAETGRDGVKVIPLSGVYIPRVNDLVIGKIVDHSSLSWEVDINSCFSAHLPAQDVFGRDFTPARDDMSKHFAIGDMITARIMAFDRTRDPMLTVQDRDLGKIERGELLMISATRVPRLIGKRGSMIQMIEQATQTRVLIGQNGIVVVTGRNPEGIKLAVRAIKMVEEEAHTANLTQRIKVLLNVPDTPPQQEVSRAPVGTGSDKPQEIESTIDEVEEELEVEGEK*