ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1574_24

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: 16666..17484

Top 3 Functional Annotations

Value Algorithm Source
ecx1; exosome complex exonuclease (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 270.0
  • Bit_score: 457
  • Evalue 1.70e-126
Exosome complex component Rrp42 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB2_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 270.0
  • Bit_score: 457
  • Evalue 6.00e-126
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 270.0
  • Bit_score: 457
  • Evalue 8.50e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 819
ATGAGCTCGTCAAGACGTGCAACAATAATCGTGGAGCATCTCCGCAAGCAGCAAATGTGGGACGCCCTCGCAAAAGGCAAAAGGCTTGATGGCAGGGATTTTGATGACCAGAGACCTCTTGAGATCGAACCTGATGTCATCAAGAAGGCAAACGGTTCTGCGCGCGTAAAGTTGGGCCATTCCGAAGTCATCGCCGGGGTCAAAATCAGCACAGGCGAGCCGTTTGAAGGCCTTGAAAATAAGGGCGCGCTAATTGTTTCAGCAGAAGTACTTCCCGTTGCATCGCCACACGCAGAGCCAGGTCCCCCCGACGAAGAAGTGGTTGAGCTCGCAAGGGTAGTCGACAGGGGAGTAAGGGAATCCGAGATGATAGATCTTGACAAGTTGGTCTTGGTGCCGGGCAAGATTGTCTACACAACTTTTGTTGACTGTAGCGTAGTCAATACTGACGGCAACTTGTTTGACACCACTTCATATGCTGTAGTGACTGCGCTTCTGAGTGCAAGGCTGCCCGTTCTTGAGATGCAGGGTGACAAAGTAGTCGACACAGGCGAGACTCGAGAAATGCCGGTCACTGCGATACCTGTTTCAATAACTGCGGCCAGAATAGGAGACTATGTGCTGATAGACCCAGCGGCTGAAGAGGAAGCCTGCATGGACGCAAGAATAACGATCACGACGAACGAAGAAGGCTTTTGCGCTATCCAGAAAGGATACACGGGATCTTTCTCAGCCGATCAGATAAAGAAAGCCGCAAAAACTGCAAGAATTAAAGGAGAAGAGGTACGTGCAAAATTGAAGGAGTTCACTGCAAGGTAG
PROTEIN sequence
Length: 273
MSSSRRATIIVEHLRKQQMWDALAKGKRLDGRDFDDQRPLEIEPDVIKKANGSARVKLGHSEVIAGVKISTGEPFEGLENKGALIVSAEVLPVASPHAEPGPPDEEVVELARVVDRGVRESEMIDLDKLVLVPGKIVYTTFVDCSVVNTDGNLFDTTSYAVVTALLSARLPVLEMQGDKVVDTGETREMPVTAIPVSITAARIGDYVLIDPAAEEEACMDARITITTNEEGFCAIQKGYTGSFSADQIKKAAKTARIKGEEVRAKLKEFTAR*