ggKbase home page

PLM3-1_170_b2_sep16_scaffold_13854_2

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: 232..2016

Top 3 Functional Annotations

Value Algorithm Source
Putative translation initiation factor IF-2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILW8_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 544.0
  • Bit_score: 770
  • Evalue 9.20e-220
translation initiation factor eaIF-5B similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 597.0
  • Bit_score: 879
  • Evalue 5.20e-253
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 597.0
  • Bit_score: 879
  • Evalue 2.60e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1785
GTGACACTCCGCCAACCAGTTGTAGTTGTATTGGGTCATGTAGACTCTGGTAAAACGTCCTTACTTGACAAGATTCGCGGGACAGCAGTACAGTCCAGAGAAGTAGGAGGAATAACTCAACATATTGGTGCAAGCTATTTCCCAATAGAAACTATTAAAGAAATAACAGGAAAATTATTTGATCAATTATCAAAATCAGAGAATCCTGTTCCAGGTCTTCTTGTAATAGATACGCCGGGTCATGAAGTGTTCGCAAATCTTCGTATGCGAGGCGGTTCTGCGGCAGATATCGCAATAGTTGTTGTTGACGTTAATAAGGGACTTGAAGCCCAAACGATCGAAAGTTTAGATATACTAAAGAACAGGAAAGTGCCGTTTGTCATAGCCCTCAACAAAATAGATCGAATATCTGGTTGGAAAAAAAACAATTCCATTTTAATTGCAGAACAGCTTAAAATTCAAGATCCAACAATTTTGTCGTATTTAGATGAAAAAATCTACAATGTTGTTGGCGCTCTGTCCCGATTAGGATATAGTTCTGAAGCCTTTTGGCGAGTCAAAGATTTTACAAAGGAACTGGCTATTGTGCCGGTAAGTGCTGTCAAAGGAACTGGAATACCTGAATTGCTTGCAGTTCTTGTAGGTTTAGCTCAACAATATATGTCTAAGAGATTGGAACGACATGAAACTGAAACAAAAGGTATCATTCTTGAAGTAAATGATGAAATAGGCCTAGGCCCATCAGCAAATGTTATTCTACTTGATGGTACACTTAAACATGGTGACAGAATCGTTGTTGCCAAAAAGGACAGTGTTACTGTTACGAAGATCAAGGCATTATTACTCCCTAAACCATTGGATGAAATGAGAGATCCAAGGGATAAATTTAGACATGTTGATAAAGTTATTGCTGCTGCAGGATTAAAAATAACCTCGCCGGATCTAGAAGGCGTGCTTGCTGGCAGTCCACTCTATGTTGTCAAAAGTCCTGATGATGAAGAAAGATTGAAATCAATTCTCGAATCTGAAATCAAGTCGGCAATAATACAAACAGAATCAAACGGGGTTATTTTAAGATGCGATACGATAGGTTCAATTGAGGCGATTACAGAACTTTTGAAAAAAGAAAATGTTCCAATCAAATCAGCTGATTTGGGGAATATTACACGAAAAGACATTCTTTCTGCTTCTGCTGTCAGAGATAAAGATCGTTACCTTGGAGTGGTTCTCGGATTCAATGTAAAAGTTTTTGAAGATGCAGAAAAGGAAGCATTTGAAAGAAAAATCAAAATTTTTAATGAAAAAATAATTTATAATTTAGTAAGAAGTTACTCTGAATGGGTAACATATGAAAAAGTTCATGAAGATTCAATCGTTTTTAATGAAATACCGCCAATTTGCAAATTTCAATTTTTGAAAGGGTATGTTTTTAGAAGAAATAATCCTGCTGTATTTGGTGCTGAAATTTTGACTGGCAAGTTGAAGCAAAAAATTTCCGTGTTGAATGAAAAAGGTAAGAAAATAGGCATAATTCATCAAATACAAAATGAAGGTAAAAATCTAGATGTTACCACCAAAGGAACCCAAGTAGCACTGTCCATAAAAGAACCCACAGTTGGCAGACAGATAAATGAAGGCGATGTATTTTATACGGATCTTAATAGCAAGGAAGCAAGACTATTACTCGAAAGATTTTCTGATAGGCTCAGTGAAGAAGAACAAGAAATTTTTAATTTCATTTTATCTAAAAAACGTGAGCTAGATCCTTCATTTGGATATATATGA
PROTEIN sequence
Length: 595
VTLRQPVVVVLGHVDSGKTSLLDKIRGTAVQSREVGGITQHIGASYFPIETIKEITGKLFDQLSKSENPVPGLLVIDTPGHEVFANLRMRGGSAADIAIVVVDVNKGLEAQTIESLDILKNRKVPFVIALNKIDRISGWKKNNSILIAEQLKIQDPTILSYLDEKIYNVVGALSRLGYSSEAFWRVKDFTKELAIVPVSAVKGTGIPELLAVLVGLAQQYMSKRLERHETETKGIILEVNDEIGLGPSANVILLDGTLKHGDRIVVAKKDSVTVTKIKALLLPKPLDEMRDPRDKFRHVDKVIAAAGLKITSPDLEGVLAGSPLYVVKSPDDEERLKSILESEIKSAIIQTESNGVILRCDTIGSIEAITELLKKENVPIKSADLGNITRKDILSASAVRDKDRYLGVVLGFNVKVFEDAEKEAFERKIKIFNEKIIYNLVRSYSEWVTYEKVHEDSIVFNEIPPICKFQFLKGYVFRRNNPAVFGAEILTGKLKQKISVLNEKGKKIGIIHQIQNEGKNLDVTTKGTQVALSIKEPTVGRQINEGDVFYTDLNSKEARLLLERFSDRLSEEEQEIFNFILSKKRELDPSFGYI*