ggKbase home page

PLM3-1_170_b2_sep16_scaffold_18967_10

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: comp(5734..6846)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INB7_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 364.0
  • Bit_score: 487
  • Evalue 7.40e-135
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 364.0
  • Bit_score: 487
  • Evalue 2.10e-135
TPR repeat protein {ECO:0000313|EMBL:AFU59094.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 364.0
  • Bit_score: 487
  • Evalue 1.00e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1113
ATGAGCAGATTTTTTAGCGCTAAAGACAAGAATGATAATTCTTCCAATAAGTCAGCAGCAGCTAATAATACGGTAGACCATCGTGACTTTCAGGTACGTGATTTGTATAAAAAAGGTGTTAATTTCATGTCTAATCAAAAATTTGATGATGCGATACGTAGTTTTGAATTAGCTCTAAGATTAGATCCAAAGTTTGTTGAAGCATGGATTAAAAAAGGGTATGCTCATTTCCATATGGGAGATTATTCTTTTGCTATTTCTTCTTATGATATGGCATTGAACATTGATCCTGATAATTATGAAGCTTGGAATTTAAAAGGACTTGCTTATTATAAGATGAATAACTATGCCAAGGCAATAGAATGCTGTACCAAAGCTTTGGATGCAAATCCAAGTGATGGATTGGTTTGGTACAATTATGCATGTTATCTCACATTAGCTGACAAAGTGGATGATGGAATGGAAGCTTTGAAAAGGGCTATTGAAATAGATATTTCCCATGCAAAAAAAGCTGTAAGGGACAGGGATTTTGAAAATGCCCGTGCAGAGGAAGGTTTTATGAGGATATTTGAAGTAGTCGTTCTCGAATCCTTACGACAAGGATACGATTATGTAGGAAAAATTGTTTGGGCAACTGGTATGGACAAACAGGATGTTGAGGATGCATTTTTAAGGCTAGGTATGAAAGGTTTGGTGACTATAAAAGAAAAGAAATCATATCTTGGGAAGGAAGTGTCTTACGAACTTTCAAGAGACATTTCAGACAAGCTGGGAGAAACGAAGCGATCTGGATTTTTCAAGTCCAAGGAATATTCAGCACCAATTCAGGAGATAAAAGATATTATTGAAATATTAGATAAATCGGTTGAGTCTGTCAAAAACGGCGATATAGATGAGACAATTGATTCATTTGAGCAACTAACAAGTCCAATGAAACATGGTAATACAATGGTTGAGCAGTTTTTTGATCAACATCGTGATTTGAGATTGTATCTAATTAGACTGAACGATAAAGGGCAAGAATATCTCGATTCACATAAATCAGAATTAACCAATTTGCTCGAAGACATTATTCAAAAAGTACGAGGCGGTCCCTTATCCAGAACAATTTAG
PROTEIN sequence
Length: 371
MSRFFSAKDKNDNSSNKSAAANNTVDHRDFQVRDLYKKGVNFMSNQKFDDAIRSFELALRLDPKFVEAWIKKGYAHFHMGDYSFAISSYDMALNIDPDNYEAWNLKGLAYYKMNNYAKAIECCTKALDANPSDGLVWYNYACYLTLADKVDDGMEALKRAIEIDISHAKKAVRDRDFENARAEEGFMRIFEVVVLESLRQGYDYVGKIVWATGMDKQDVEDAFLRLGMKGLVTIKEKKSYLGKEVSYELSRDISDKLGETKRSGFFKSKEYSAPIQEIKDIIEILDKSVESVKNGDIDETIDSFEQLTSPMKHGNTMVEQFFDQHRDLRLYLIRLNDKGQEYLDSHKSELTNLLEDIIQKVRGGPLSRTI*