ggKbase home page

PLM3-1_170_b2_sep16_scaffold_87249_2

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: 344..1063

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IE52_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 244.0
  • Bit_score: 357
  • Evalue 9.80e-96
rps2p; 30S ribosomal protein S2p similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 239.0
  • Bit_score: 369
  • Evalue 7.00e-100
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 239.0
  • Bit_score: 369
  • Evalue 3.50e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrososphaera viennensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 720
ATGGCAAGTGAAGATCAAAAAGAAAACACTGACGATCCTTTGATTGAAACAAAAAATGAAGTAAAACTTGATGACACATCAAACCAATCATACATTGAATCGGGAGAGGAAAGTGAAAATGATAATTTAGAAAAAATGATACTTTCAACAGGAATACGTGTAGGTACTCCTGTAAAAACTAAATTTATGTCACCATTCATTGTTCGGGCAAATCCCGAAGGCCTTTATATTTTAGATATTAGTAAAACACTTACAAGGATAGATGTTGCTGCAAAATTCATTGGTAGATCTGATATTTCTAAAATTATAGTTACATCAGCGAGAGAATATGGAAAAACACCTGTCCAGAAATTTTGTGAAGTAACTGGAGCTTCTGGAATTATAGGACGTTTTATGCCCGGAACTTTTACAAATCCGTCTTTGTCAAGTTACATGGAACCCGAGGTAGTCATTGTCACAGATCCCCAAGCCGATCAGCAAGCTGTGTTGGAAGCAACAAGAGCGGGCGTTCCGGTCGTTGCTATTGCAAATAGCGATAACGTGACATCTAATGTGGATCTGGTTATTCCTGCAAACAACAGAGGAAGAAAAGCACTCGCAACCGTGTATTGGTTATTGACAAGGGAAGTATTGAAGAAACAGGGAAAGATAAAATCTGATAATGAAATGAAGATATCAATCGACGACTTTGAGACCAAATTGGTCGAAGAGATATCTTGA
PROTEIN sequence
Length: 240
MASEDQKENTDDPLIETKNEVKLDDTSNQSYIESGEESENDNLEKMILSTGIRVGTPVKTKFMSPFIVRANPEGLYILDISKTLTRIDVAAKFIGRSDISKIIVTSAREYGKTPVQKFCEVTGASGIIGRFMPGTFTNPSLSSYMEPEVVIVTDPQADQQAVLEATRAGVPVVAIANSDNVTSNVDLVIPANNRGRKALATVYWLLTREVLKKQGKIKSDNEMKISIDDFETKLVEEIS*