ggKbase home page

PLM3-1_200_b1_sep16_scaffold_9593_4

Organism: PLM6_200_b1_sep16_Deltaproteobacteria_56_19

near complete RP 42 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(1824..3425)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 533.0
  • Bit_score: 822
  • Evalue 2.40e-235
protein translocase subunit similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 531.0
  • Bit_score: 534
  • Evalue 2.80e-149
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 533.0
  • Bit_score: 825
  • Evalue 2.30e-236

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGCCACGAGGCGTAACATCCCGCTTGGTTGTATTTTTAGTTTCCATTTGCGCCGCAGTTTTTTATCTTGTCCCCAACTTTGTCGAGAGGATGCCTTCCTGGTGGCCCGGGTTCCTTCCGAGCGAACGCATCCATCTGGGATTGGACCTGCAAGGAGGCACGCATCTCATTTTGGAAGTCAAAGTGGACAAGGCGGTGGAAAATGCCGTAGAGCAGATCAAGGGCGAGCTGCGTACCCTGCTCAGGGAGAAAGGGATTGCTTCCGTTGAGTTCGACCGGGCCCAGGGAAATCAGATCAAGCTGAAGGTCCCTGCGGAGAGCGGGGAGAGGGTGCGGGAACTCTTGAAGAACGACTTTCCCAATCTCGTCCTGGTAACCTCTCAACCGTCAGCGGGACGGCACGAGCTTACGCTTGCAGTGCAAGAGAAAGAGGTTCGTGACTTGAGGGATTACGCAGTGGATCAGTCGATCGAGACCATTCGCAACCGCATCGACCAGTTCGGCGTGAGCGAACCGATCATTCAGCGGCGTGGCCAGCAGGATATCTTGATCCAGTTGCCGGGCATCCAGGATCCGGACAGGGCGAAGGAGATCATCGGCAAGACCGCCCTGCTTGAATTTAAGCTTGTGGACGACGTTCGCAGTGTAGAGGAGGCCGTGCTAAAGGGCACTCCTCCCGGTCTGCAGATCCTCTACGGTTTCACGCCGAAGAGAGACGGAGGGGTGGGATCCGACAAAACCCCTTACCTCTTGGAGGCGCGGACTCTCATGACCGGAGAGTACATCACGGATGCGCGCGTCCGGCCCACCTCGGGGCTGGAAGGTCCTTATGTAGAGCTGATTCTCAATGCCGCCGGGGCGCGGCTCTTTGAGAAGATCACAGCGGAGAATGTAAATCGGCGCCTCGCTATCGTTCTCGATAATCGTGTCTACTCGGCGCCGGTCATTAAGGAGCGCATCGGCGGCGGGCGGGCATCGATTACCGGGAGCTTCGATATCAAAGAGGCGCGTGATCTTGCTATCGTCCTTCGGGCGGGCGCCCTGCCCGCTCCGGTGGAGATTGTGGAGGAGCGCACCGTCGGGCCGTCCTTGGGGCGCGACTCGATCCGCCAGGGGATTACCTCCTTTATCGTCGGCAGCTCTCTGGTCGTCATTTTTATAATCGCCTACTATAAGGGCGCGGGCCTCGTCGCCGACGTGGCGTTGCTCTTTAACGTCCTCTTCATGTTGGCCATCTTGGCCGGCTTCCAGGCGGTCTTGACGCTGCCCGGTATCGCCGGGATCGTGCTGACCATGGGGATGGCCGTGGATGCCAATGTCCTCATCAACGAGCGCATCCGCGAAGAGCAGAGAGCGGGAAAGTCTCCCCGCGCCGCGGTGGAGGCGGGTTACGAAAGGGCCTTGCCCGCCATCCTGGACTCGAACATCACCACGTTCTTGTCCGGGGTGATCCTTTTTCAGTTCGGCACCGGTCCGATCAGAGGTTTTGCCGTGACCCTTTGCGTGGGGATTTTAACCACCGTGATCACGGCCGTTTACTTGACCCGCGTCTATTACGACTATCGCCTGGCTAACAGGAAATTGGCGCGCATCAGCATCTGA
PROTEIN sequence
Length: 534
MPRGVTSRLVVFLVSICAAVFYLVPNFVERMPSWWPGFLPSERIHLGLDLQGGTHLILEVKVDKAVENAVEQIKGELRTLLREKGIASVEFDRAQGNQIKLKVPAESGERVRELLKNDFPNLVLVTSQPSAGRHELTLAVQEKEVRDLRDYAVDQSIETIRNRIDQFGVSEPIIQRRGQQDILIQLPGIQDPDRAKEIIGKTALLEFKLVDDVRSVEEAVLKGTPPGLQILYGFTPKRDGGVGSDKTPYLLEARTLMTGEYITDARVRPTSGLEGPYVELILNAAGARLFEKITAENVNRRLAIVLDNRVYSAPVIKERIGGGRASITGSFDIKEARDLAIVLRAGALPAPVEIVEERTVGPSLGRDSIRQGITSFIVGSSLVVIFIIAYYKGAGLVADVALLFNVLFMLAILAGFQAVLTLPGIAGIVLTMGMAVDANVLINERIREEQRAGKSPRAAVEAGYERALPAILDSNITTFLSGVILFQFGTGPIRGFAVTLCVGILTTVITAVYLTRVYYDYRLANRKLARISI*