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PLM3-1_50_b1_sep16_scaffold_500

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Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_500_31
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25956..27308)
DNA (1353bp) protein (451aa)
Putative cytochrome b/b6/petB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE8_NITGG
cytochrome b subunit of the bc complex
Cytochrome b subunit of the bc complex {ECO:0000313|EMBL:AIF83640.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_500_32
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27370..27981)
DNA (612bp) protein (204aa)
Rieske iron sulfur protein Tax=Cenarchaeum symbiosum (strain A) RepID=A0RTJ3_CENSY
petC; putative Rieske 2Fe-2S domain cytochrome b6-f complex iron-sulfur subunit
Putative Rieske 2Fe-2S domain cytochrome b6-f complex iron-sulfur subunit {ECO:0000313|EMBL:AIC14448.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_500_33
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(28122..28535)
DNA (414bp) protein (138aa)
Putative thioesterase superfamily protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGU9_NITGG
thioesterase superfamily protein
Putative thioesterase superfamily protein {ECO:0000313|EMBL:AFU57042.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_500_34
unknown

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comp(28587..28718)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_500_35
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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28894..29172
DNA (279bp) protein (93aa)
50S ribosomal protein L44e Tax=Candidatus Nitrososphaera gargensis RepID=K0ILF6_NITGG
LSU ribosomal protein L44E
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_500_36
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(29355..30002)
DNA (648bp) protein (216aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG3J11 RepID=B3T7V6_9ARCH
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AIC16694.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_500_37
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(30005..30748)
DNA (744bp) protein (248aa)
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Cobalamin synthase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYQ6_9ARCH
PLM3-1_50_b1_sep16_scaffold_500_38
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(30738..31709)
DNA (972bp) protein (324aa)
cobD; cobalamin biosynthesis protein CobD (EC:6.3.1.10)
Probable cobalamin biosynthesis protein CobD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE05_NITGG
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_500_39
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(31713..32567)
DNA (855bp) protein (285aa)
cobyric acid synthase (EC:6.3.5.10)
Probable cobyric acid synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILF9_NITGG
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_500_40
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(32564..33637)
DNA (1074bp) protein (358aa)
Putative aminotransferase class I and II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBX8_NITGG
aminotransferase class I and II
Putative aminotransferase class I and II {ECO:0000313|EMBL:AFU57055.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_500_41
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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33732..34808
DNA (1077bp) protein (359aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|RuleBase:RU004501}; EC=1.2.1.11 {ECO:0000256|RuleBase:RU004501};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Aspartate-semialdehyde dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I718_NITGG
asd; aspartate-semialdehyde dehydrogenase
PLM3-1_50_b1_sep16_scaffold_500_42
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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34894..35358
DNA (465bp) protein (155aa)
Putative transcriptional regulator, AsnC family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG5_NITGG
transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIC16701.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_500_43
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(35535..35924)
DNA (390bp) protein (130aa)
Prefoldin subunit beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID44_NITGG
pfdB; prefoldin, subunit beta
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_500_44
unknown

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36022..36318
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_500_45
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(36443..37267)
DNA (825bp) protein (275aa)
ecx1; exosome complex exonuclease (EC:3.1.13.-)
Exosome complex component Rrp42 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB2_NITGG
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_500_46
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(37267..38001)
DNA (735bp) protein (245aa)
ecx2; exosome complex exonuclease (EC:3.1.13.-)
Exosome complex component Rrp41 {ECO:0000256|HAMAP-Rule:MF_00591}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00591};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Exosome complex component Rrp41 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID49_NITGG
PLM3-1_50_b1_sep16_scaffold_500_47
unknown

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comp(37988..38125)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying items 31-47 of 47 in total

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