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PLM3-1_50_b1_sep16_scaffold_2031_21

Organism: PLM6_50_b1_sep16_Thaumarchaeota_Marine_Group_I_36_8

near complete RP 33 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 37 / 38 MC: 1
Location: comp(18466..18876)

Top 3 Functional Annotations

Value Algorithm Source
Rpc34 (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=D9ZB65_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 112
  • Evalue 3.10e-22
RNA polymerase subunit, Rpc34-like protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 112
  • Evalue 8.80e-23
Putative RNA polymerase subunit, Rpc34-like protein {ECO:0000313|EMBL:AFU60353.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 112
  • Evalue 4.40e-22

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 411
ATGTATAAAAATAAACACGAATTATTTGAGCAGGTATTTCAAGCAATTCTGAAAAGCGGTGAGGACGGTGTTTTTCAAACGGAAATTTGCAAGGAATTTTCTCTTGACAGTAGAGACGGATCGAGACTTGCAGGTAATCTTGAAAAGCAATCATTGATATCACGTGAAAAAATATTGCACAAAGGCAGGTGGACATACAAATTAATAGTCAAGAAATCAGCAATTGCTGAATACAATCGAAAGCCAGTACAGATTGAATCTGTTGAAGGAGCCCCATGCTTCAGTTGTGCTTATCAGCATTCATGTTCTTCTGAAGATGAGACCAGCCCTTACAGTCCTGCAAAGTGTGTTTGGCTGGAAGAATGGATTATCGCTGGTTTCGAAAAGAGCTACATAAAGAACGAAAAATAA
PROTEIN sequence
Length: 137
MYKNKHELFEQVFQAILKSGEDGVFQTEICKEFSLDSRDGSRLAGNLEKQSLISREKILHKGRWTYKLIVKKSAIAEYNRKPVQIESVEGAPCFSCAYQHSCSSEDETSPYSPAKCVWLEEWIIAGFEKSYIKNEK*