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PLM3-1_50_b1_sep16_scaffold_294_18

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(17311..18444)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 Tax=Holophaga foetida DSM 6591 RepID=H1NWN2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 343.0
  • Bit_score: 157
  • Evalue 1.40e-35
Arabinose efflux permease similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 369.0
  • Bit_score: 221
  • Evalue 2.90e-55
Arabinose efflux permease {ECO:0000313|EMBL:AHY47172.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 369.0
  • Bit_score: 221
  • Evalue 1.40e-54

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Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
GTGCTGGCCTCAGCGGTCGGCTTCTTCGAGGCTCTGCTGTTCTCCGTTCTGGCACCGCTCCTCCCGGACTTCGAGGAGGAGCTCGGGCTGTCGAAGGCGAGCGCCGGGCTGCTCACGTCAGCCTACGCAGCGGGTGCTTTCATCGGAGCGCTCCCGAGCATCTGGGCCGCGCGCCGCTTCGGGGTCAAGGCCACCGTGGTCGCCGGGCTGATCCTGCTCGCTGTCTCGAGCGCCGCGTTCACGGTCCCCGATCCCGCCTGGCTCGTGTTCGCAGCCAGGGTCGGCCAGGGAGCCGGTAGCGCGTTCGCCTACACCGGCGCTTTGGCCTGGCTGACCGCCGTGGCGCCACTCGCCAGACGGGGCGAAGCGATCGGGGTCGCCTTTGCGGCCACCTTCTCGGGTGAGCTCGTGGGGCCGCTCGTGGGGGCAGCCGCCGCCTCGACCGGGCTGGCGGTCGTGTTCTCCATCATCACTACGCTCGCATTGCTCCTCGCCGCGGTGGCCGCAACGATGCGGTCGCCGGCTCAGGACGATGTCAGCGTTCCGTCGATGCGCGCGCTCGCGGGCAACCGGGTCATTCGGCTCGGGGCATGGCTCATCGCGCTAACGGCACTCCTGTTGGGGATGCTCGGCGTTCTGGCACCGCTCAGGCTGGACGAGCTCGGCTGGGGGGCGGCGGCGATCGGGGCTGCCTTCGCGGTCGCAGCTCTGTTGCAGGCTGCCGTCAATCCAGTGATCGGCCGCGTCGCAGACACCAGAGGGGATGCGTTGCTGCTGCGGGCGGGACTGATTCTCTCGGGAGTGGCGTCGGCTCTCCTCGTGCTCGATGGACGCGCGCTCCTCTACGCCGCGATCGTGATCGCGGCGGGTGTTGCGTACTCGATGCTCTGGACGCCCGCCCTGGCGATGCTCTCCCAGACGGTCGAGCGCCACGGTTTCGACCACGCAACCGGCTTCGGTCTCATGAGCGCCGCGTGGCCGCCCGGGTTCGCGATTGGTGCTGCTGCAGGTGCTGCACTTGCGGGCGCGACCCGAGACGCTTGGCCGTACCTACTTGGCACCGTCTTGTGCCTGTTGTCGTTGCCGCTGCTCGGCGTCGCGGCGCCGCGCGCCGGCCCGGCTCGCAGACCGTGA
PROTEIN sequence
Length: 378
VLASAVGFFEALLFSVLAPLLPDFEEELGLSKASAGLLTSAYAAGAFIGALPSIWAARRFGVKATVVAGLILLAVSSAAFTVPDPAWLVFAARVGQGAGSAFAYTGALAWLTAVAPLARRGEAIGVAFAATFSGELVGPLVGAAAASTGLAVVFSIITTLALLLAAVAATMRSPAQDDVSVPSMRALAGNRVIRLGAWLIALTALLLGMLGVLAPLRLDELGWGAAAIGAAFAVAALLQAAVNPVIGRVADTRGDALLLRAGLILSGVASALLVLDGRALLYAAIVIAAGVAYSMLWTPALAMLSQTVERHGFDHATGFGLMSAAWPPGFAIGAAAGAALAGATRDAWPYLLGTVLCLLSLPLLGVAAPRAGPARRP*