ggKbase home page

PLM3-1_50_b2_sep16_scaffold_18863_3

Organism: PLM6_50_b2_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1061..2050)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 326.0
  • Bit_score: 150
  • Evalue 1.90e-33
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 298.0
  • Bit_score: 117
  • Evalue 5.10e-24
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 327.0
  • Bit_score: 412
  • Evalue 4.90e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAAATTTGTACTTGCTATCTTGTTCCTCGTAGCTTGGGTCATCCCACCCGCACCTGTTCACTCTCAGTCGATCATGATGGGCTACAGCGGAGCCGGAATCAGCACTGATCTCCGCCGGGTCATCGAAAAGGAAAAACTCTGGGACAAATATGGCGTCAACGTCAAAGCGATTTACTTTAACAGCGGCAGCGTTTTGACCCAGGCAATGGCGGGCGGCAACATCAATCTCTCCGACTCCGATGTGCCTGCCATGCTCAATTTGTCCGTCTCGGGAGTCATGGACCTCAAGACCATCAGCGTTACATTCAACCGGCTCGAACACATTTTTGTCGCGCGGAAAAATATTGCCAGACCTGAAGATCTCCGAGGAAAACGGGTGGCCGTGAGCCGGATCGGCTCGGCGTCGGATATCGTGACCCGCATGGTGATACGCCAGTGGAAGATCGACCCCGAGAAGGAAGTCACTATCCTCCAATCCGGCAATACACCGACGCGCATGACAGCATTGTTAGCAGGCCATGTCGATGCGGCGTTGATCAGCCCGGACAATATCGCCAAGATTCTTGGCACCGGCTGCTGCCGCGTGCTCGTCGACCTCTCGGAATTGCCTTTGGATTATGCCCGTTTCGGCGGCACGGTCCCAACGTCAATGGTCAAGACTCAACGCGATACGCTGCGCGGATATCTTCAGGCGACCATTGAAGGAATCTACTTCTTCAAGACCCGGCCCAAGCTTGTGTACTCCATTTTCGAGGAGGAAGGCATCAAAGAGCCGGCAGTTCAAAAGGACCTCCACGAGCGGCTGGCCAAGAGCCTCCGGGAATATCCCATCCCGGAGGCCAACGGCATTCAGGGGGCTCTTGATTCCCTGACCCATCCCAATTCGCGAACGACAAAACCAGTAAGCCTCATGGACACGAGCATCATCGAAGAAATCAAAAAGTCCGGCTTCATCGACAAACTCTACGGCCGGCCGCCGAAAAATTGA
PROTEIN sequence
Length: 330
MKFVLAILFLVAWVIPPAPVHSQSIMMGYSGAGISTDLRRVIEKEKLWDKYGVNVKAIYFNSGSVLTQAMAGGNINLSDSDVPAMLNLSVSGVMDLKTISVTFNRLEHIFVARKNIARPEDLRGKRVAVSRIGSASDIVTRMVIRQWKIDPEKEVTILQSGNTPTRMTALLAGHVDAALISPDNIAKILGTGCCRVLVDLSELPLDYARFGGTVPTSMVKTQRDTLRGYLQATIEGIYFFKTRPKLVYSIFEEEGIKEPAVQKDLHERLAKSLREYPIPEANGIQGALDSLTHPNSRTTKPVSLMDTSIIEEIKKSGFIDKLYGRPPKN*