ggKbase home page

PLM3_127_b1_sep16_scaffold_6431_3

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(1589..2095)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional repressor NrdR bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 162.0
  • Bit_score: 292
  • Evalue 2.10e-76
nrdR; transcriptional regulator NrdR similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 168.0
  • Bit_score: 185
  • Evalue 7.80e-45
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 167.0
  • Bit_score: 298
  • Evalue 3.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGAAGTGCCCGTTCTGCGGCCACACCGAGGACCGCGTGGTGGACTCGCGGGTGGGCCGGGACGGGGAGTTCATCCGCCGGCGCCGCGCCTGCCTCAAGTGCAACCGCCGCTACACGACCTACGAGTACATCGAGGACGTGCTGCCCCACGTGGTCAAGCGCGACGGCCGCCGCGAGCCCTTCGACCGCCAGAAGCTGCGCGGCTCGATCCTGAAATCCTGCGAGAAGCGCTCGGTGGGCGTGCAGGCGGTGGACGACGTGGTGGCCGACATCGAGGCCAAGCTGCACGACCGGGCCGAGAAGGAGATCACGAGCCTCGAGCTGGGCGAGATCGTGATGGAGCACCTGCAGAAGCTGGACCAGGTGGCCTACGTGCGGTTCGCCTCGGTGTACCGCCAGTTCAAGGACATCTCGCAGTTCATGGACGAGGTGAAGCACCTCATCAAGGACGACAAGCCGGCCAAGGTCGCGCCCGGCAAGGCGCCCAAGGCCACCGCCAAGCGGTAG
PROTEIN sequence
Length: 169
VKCPFCGHTEDRVVDSRVGRDGEFIRRRRACLKCNRRYTTYEYIEDVLPHVVKRDGRREPFDRQKLRGSILKSCEKRSVGVQAVDDVVADIEAKLHDRAEKEITSLELGEIVMEHLQKLDQVAYVRFASVYRQFKDISQFMDEVKHLIKDDKPAKVAPGKAPKATAKR*