ggKbase home page

PLM3_127_b1_sep16_scaffold_19706_2

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(310..1524)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 404.0
  • Bit_score: 729
  • Evalue 9.40e-208
amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 389.0
  • Bit_score: 337
  • Evalue 5.00e-90
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 404.0
  • Bit_score: 729
  • Evalue 1.30e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGACAAGGTCACACGGCGGAAGTTCCTCGGCGGAGCAACGCTCGCGGCGGCCGGCACGGCGATGGGGCCGTGGGTGCTGCGCGCCGGCGCGCAGTCGGGCCCGATCAAGATCGGCGTCGTGCTGCCGTACTCGGGCGTCTACGCGGTGCTCGGCGAGAGCATCACGCAGGGCATGGAGCTGGTCTTCGCCCGCGAGAACTGGACGGTGGCGGGGCGCAAGATCGAGATGATCAAGGAAGACGACGAGATGCAGCCGCCGGTGGGCCTCCGCAAGACGGAGAAGCTGATCGACTCCGACAAGGTGGACATCCTCACCGGGCCCGTGCACAGCGGCATCCTGATGGGCATGCGCGACAAGGTCCACAACAGCAAGACCATCCTGATCGTCTCCAACGCGGGCGCGGACGCCATCAGCCGCGGGCGCTGCTCGAAGTGGATCTTCCGCACCTCGTTCTCGAACTGGCAGCCCTGCCAGCCCATGGGCGGCTGGGTCGCGAAGAATGTGTCGAAGGACGTGTTCCTGACCGCGCCCAACTACCAGGCCGGCAAGGACATGATGAACGCCTTCAAGGAGACCTTCGTCCCGGCCGGCGGCAAGGTGGTGGACGAAGACTACCCGAAGCTGGGGGAGACCGACTACGCGCCGTATCTCACCAAGATCCGGCAGTCCGGCGCCAAGGCGGTATTCGCCTTCTTCTCGGGCACGGACGCGGTGAACTTCGTGAAGCAGTTCGATCAGTTCGGGCTCAAGCAGAACATCAAGCTCACCGGCGCGGGCTTCCTGACCGAGCCCGACGTGCTGCCCGCCCAGGGCAAGTCGGCTCTCGGCGTGATCACCGGCCACTTCTACACGCCGGTGCTCGACAACCCGACCAACCAGCGCTTCGTGAAGGAGTTCCGCGAGAAGTTCGGCGGCAAGATGCCGGACGGCTTCGCCTGCCAGGGCTACGACACCGCGGAGGTCATCGTGCGCGCGCTCAAGGCGGTGAACGGCAACACGCAGGACAAGATGAAGCTGGTGGAGGTCATCGAGAAGAGCGAGTTCGACAGCCCGCGGGGTCGCTTCCGCTTCGACCCCAAGAGCCACAACGTGATCCAGCCCTTCATCTACGTCCGCGAGGTGAAGGAAGTGGCGGGCGGGCTCAACAACGTGCCGATCGACAAGGTCGCCAACGTGACGGATCCCGGCACCGGCTGCACGCTCCCGGCCTAG
PROTEIN sequence
Length: 405
MDKVTRRKFLGGATLAAAGTAMGPWVLRAGAQSGPIKIGVVLPYSGVYAVLGESITQGMELVFARENWTVAGRKIEMIKEDDEMQPPVGLRKTEKLIDSDKVDILTGPVHSGILMGMRDKVHNSKTILIVSNAGADAISRGRCSKWIFRTSFSNWQPCQPMGGWVAKNVSKDVFLTAPNYQAGKDMMNAFKETFVPAGGKVVDEDYPKLGETDYAPYLTKIRQSGAKAVFAFFSGTDAVNFVKQFDQFGLKQNIKLTGAGFLTEPDVLPAQGKSALGVITGHFYTPVLDNPTNQRFVKEFREKFGGKMPDGFACQGYDTAEVIVRALKAVNGNTQDKMKLVEVIEKSEFDSPRGRFRFDPKSHNVIQPFIYVREVKEVAGGLNNVPIDKVANVTDPGTGCTLPA*