ggKbase home page

PLM3_127_b1_sep16_scaffold_25075_4

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 1374..1922

Top 3 Functional Annotations

Value Algorithm Source
Transcription antitermination protein nusG bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 325
  • Evalue 3.10e-86
NusG antitermination factor similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 176.0
  • Bit_score: 221
  • Evalue 1.80e-55
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 325
  • Evalue 4.40e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCGAGACGGGTACCACCGCGAAGCAGTGGTTCGTGGTCCACACCTACTCGGGCTTCGAGAACAAGGTGGCGTCCGGTATCGAGTCTCGCGCCAAGATCTTCGGGCTGCAGGGCATGATCGGGCGCGTGATCGTGCCGACCGAGAAGGTGCGGGAGATCCGCAAGAGCAAGAAGATCGAGACGGAGCAGAAGTTCTTCCCGGGCTACCTCCTGGTGGAGATGGACCTCACGGACGACACGTGGCATCTCGTCCGCTCCACTCCCAAGGTCACCGGGTTCGTGGGCTCGGGCAACAAGCCGGTGGCGCTGCCCGCGGAAGAGGTCGAGGGCATCCTGCGGCAGATGGAGGAGGGCGCCGAGAAGCCCAAGCTCAAGTCCACCTTCCAGAAGGGGGACAAGGTGCGGGTGATCGAGGGGCCCTTCGTGAACTTCCAGGGCGCCATCGACGACTTGAATCCGGAGCGCGGCAAGCTCAAGGTCATGGTGGCCATCTTCGGGCGGCTCACGCCCGTCGAGCTCGAGTACTACCAGGTGGAGAGGCTCTAG
PROTEIN sequence
Length: 183
MSETGTTAKQWFVVHTYSGFENKVASGIESRAKIFGLQGMIGRVIVPTEKVREIRKSKKIETEQKFFPGYLLVEMDLTDDTWHLVRSTPKVTGFVGSGNKPVALPAEEVEGILRQMEEGAEKPKLKSTFQKGDKVRVIEGPFVNFQGAIDDLNPERGKLKVMVAIFGRLTPVELEYYQVERL*