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PLM3_127_b1_sep16_scaffold_25899_3

Organism: PLM3_127_b1_sep16_Rokubacteria_70_8

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(2602..2961)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 117.0
  • Bit_score: 156
  • Evalue 1.60e-35
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 118.0
  • Bit_score: 109
  • Evalue 5.00e-22
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 117.0
  • Bit_score: 156
  • Evalue 2.30e-35

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 360
GAGGGCAAGGGCAAGCGGGCGGTCACGCGCTTTCAGGTGCTCGAGCGCCTCGGTGCCGCGGCCGGCGCCGTCTCCTTCATCGAGTGCCGGCTCGAGACCGGGCGCACCCATCAGATCCGGGTGCACCTGGCCTCGCTGGGCCACCCGCTCCTGGGAGACGATACCTACCGGGGGCGTCGCGCGGCGCCGGCGGGGGATCCCCGGCTCACGGATCTGATCGCCGGACTCGGCGGAGTGGCTCTCCACGCGGCCGGTCTCGCGTTCGCGCACCCGACGACGGGCGCGCCGATGGAATTTTCGTGTCCTCTCCCCGACAGGATCGGCCAGATCTTGTCTCATCTGCGCAACAGGACGCGCTAG
PROTEIN sequence
Length: 120
EGKGKRAVTRFQVLERLGAAAGAVSFIECRLETGRTHQIRVHLASLGHPLLGDDTYRGRRAAPAGDPRLTDLIAGLGGVALHAAGLAFAHPTTGAPMEFSCPLPDRIGQILSHLRNRTR*