ggKbase home page

PLM3_127_b2_sep16_scaffold_2986_39

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 40803..41510

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 231.0
  • Bit_score: 345
  • Evalue 3.80e-92
putative ABC transporter similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 235.0
  • Bit_score: 269
  • Evalue 5.70e-70
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 231.0
  • Bit_score: 346
  • Evalue 2.40e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGACGCCGTCCGTCCTCGAGGCGGAGAACGTCCACACGTACTACGGGGACAGCCACATCCTGCACGGTGTCTCCCTGCGGGTCGGGGCCGGCGAGGCGGTGGCCATCCTCGGGCGCAACGGCGCGGGCAAGACCACGCTCATCCGGACCATCGTGGGCTTCACCCCGCCCCGCGCGGGCCTCGTGCGCTTCCGTGACGAAGCCGTGCAGGGCGCGCCCGCGCACGAAATCGCGCGGCGCGGCGTCGGACTGGTGCCCCAGGGGCGCCGCATCTTCGCCCCGCTTTCGGTCAGCGAGAATCTGACATTGGGGGCTCGGAGCGTGCCCGACGGCTGGACCCTGGAGCGCATCTACGCCGCGTTCCCGCGCCTGCGGGAGCGCGCGAGCCAGGGCGGCGGGACGCTGTCGGGCGGAGAGCAGCAGATGCTGGCGGTGGCGCGGGCCCTCATGACGAATCCGCGCTTGCTCCTGCTCGACGAGCCCTCGGAGGGCCTGGCGCCCATCGTCGTCCGCGAGATCGGTCGCGTGCTGGTGCGCCTCAAGGGGGAAGGGCTCAGCATCCTGCTCGTGGAGCAGAACGTCCCGCTGGCCCTTCGCGTGGCCGACCGCGTGTACGTCATGAGCAAAGGGCAGATTGTGTACCATGGCTCTCCGTCGGAGCTGAACGCGAACGAGGACGTCAAGCGACGCTTCCTGGGGGTGTCATGA
PROTEIN sequence
Length: 236
MTPSVLEAENVHTYYGDSHILHGVSLRVGAGEAVAILGRNGAGKTTLIRTIVGFTPPRAGLVRFRDEAVQGAPAHEIARRGVGLVPQGRRIFAPLSVSENLTLGARSVPDGWTLERIYAAFPRLRERASQGGGTLSGGEQQMLAVARALMTNPRLLLLDEPSEGLAPIVVREIGRVLVRLKGEGLSILLVEQNVPLALRVADRVYVMSKGQIVYHGSPSELNANEDVKRRFLGVS*