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PLM3_127_b2_sep16_scaffold_327

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_327_31
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30536..31711)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI0003694FF1
porin
Porin Gram-negative type {ECO:0000313|EMBL:BAK76299.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
PLM3_127_b2_sep16_scaffold_327_32
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32442..33251)
DNA (810bp) protein (270aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=TRPC_POLSJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_33
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(33295..33672)
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VHN2_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_327_34
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33714..34739)
DNA (1026bp) protein (342aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRJ6_ACCPU
PLM3_127_b2_sep16_scaffold_327_35
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35025..35591)
DNA (567bp) protein (189aa)
Anthranilate synthase component II Tax=Thauera sp. 63 RepID=N6XCT9_9RHOO
Anthranilate synthase component II {ECO:0000313|EMBL:ENO79561.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
glutamine amidotransferase of anthranilate synthase
PLM3_127_b2_sep16_scaffold_327_36
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35818..37293)
DNA (1476bp) protein (492aa)
trpE; anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase, aminase component Tax=Nitrosospira sp. APG3 RepID=M5DLP7_9PROT
Anthranilate synthase subunit I {ECO:0000313|EMBL:GAO36705.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PLM3_127_b2_sep16_scaffold_327_37
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37750..38409)
DNA (660bp) protein (220aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-5-phosphate 3-epimerase Tax=mine drainage metagenome RepID=T1D689_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_38
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38539..38931
DNA (393bp) protein (131aa)
Protein ApaG Tax=Nitrosospira sp. APG3 RepID=M5DWB6_9PROT
apaG; ApaG protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_327_39
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39226..39828
DNA (603bp) protein (201aa)
Phosphatidylethanolamine N-methyltransferase {ECO:0000313|EMBL:ABB73657.1}; EC=2.1.1.17 {ECO:0000313|EMBL:ABB73657.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Phosphatidylethanolamine N-methyltransferase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC64_NITMU
UbiE/COQ5 methyltransferase
PLM3_127_b2_sep16_scaffold_327_40
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40004..41191
DNA (1188bp) protein (396aa)
MltA domain-containing protein Tax=Sulfuricella denitrificans skB26 RepID=S6ANC1_9PROT
Murein transglycosylase {ECO:0000313|EMBL:GAO36701.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
MltA domain-containing protein
PLM3_127_b2_sep16_scaffold_327_41
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41476..42153)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AAX6_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_42
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42223..42966)
DNA (744bp) protein (248aa)
disulfide isomerase Tax=Thiobacillus denitrificans RepID=UPI0003643107
dsbC; thiol:disulfide interchange protein DsbC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_43
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43009..44067)
DNA (1059bp) protein (353aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GG07_NITSI
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:AEJ00117.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
PLM3_127_b2_sep16_scaffold_327_trna_1
unknown

Not on your lists

44300..44373
DNA (74bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_327_44
Chaetomium globosum, Chaetomium, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

44812..45096
DNA (285bp) protein (95aa)
Putative uncharacterized protein Tax=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) RepID=Q2GPE0_CHAGB
Putative uncharacterized protein {ECO:0000313|EMBL:EAQ83760.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium.;" source="Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC; 6347 / NRRL 1970) (Soil fungus).;"
PLM3_127_b2_sep16_scaffold_327_45
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45104..46438
DNA (1335bp) protein (445aa)
(dimethylallyl)adenosine tRNA methylthiotransferase Tax=Ideonella sp. B508-1 RepID=UPI00034C203F
(dimethylallyl)adenosine tRNA methylthiotransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_327_46
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46435..47388
DNA (954bp) protein (318aa)
PhoH family protein Tax=Nitrosomonas sp. AL212 RepID=F9ZDF4_9PROT
phoH family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_327_47
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47396..47884
DNA (489bp) protein (163aa)
Endoribonuclease YbeY Tax=Sulfuricella denitrificans skB26 RepID=S6AJA0_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_48
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47981..48790
DNA (810bp) protein (270aa)
CBS domain-containing protein Tax=Sulfuricella denitrificans skB26 RepID=S6AAZ3_9PROT
corC; CBS domain-containing protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_327_49
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48780..50360
DNA (1581bp) protein (527aa)
Apolipoprotein N-acyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6ADD3_9PROT
apolipoprotein N-acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_50
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50618..51559
DNA (942bp) protein (314aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit Tax=Bordetella avium (strain 197N) RepID=SYGA_BORA1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_327_51
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51556..53691
DNA (2136bp) protein (712aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
glycyl-tRNA synthetase subunit beta Tax=Bordetella sp. FB-8 RepID=UPI00037CEF69
PLM3_127_b2_sep16_scaffold_327_52
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53776..54309
DNA (534bp) protein (178aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
D,D-heptose 1,7-bisphosphate phosphatase Tax=Sulfuricella denitrificans skB26 RepID=K6UVH8_9PROT
gmhB; D,D-heptose 1,7-bisphosphate phosphatase
PLM3_127_b2_sep16_scaffold_327_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54306..55031
DNA (726bp) protein (242aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Nitrosospira sp. APG3 RepID=M5DGF3_9PROT
phospholipid/glycerol acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_327_54
unknown

Not on your lists

comp(55154..55309)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_327_55
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55433..56677
DNA (1245bp) protein (415aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase Tax=Sulfuricella denitrificans skB26 RepID=S6AZU0_9PROT
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_327_56
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56759..57229
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Pandoraea pnomenusa 3kgm RepID=V5PTA9_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_327_57
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57374..58270
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Thauera RepID=N6YJL8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO81854.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_327_58
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58696..59007
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1Y9V3_9DELT
protein of unknown function DUF497
Tax=RBG_16_Betaproteobacteria_56_24_curated
PLM3_127_b2_sep16_scaffold_327_59
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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59016..59255
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IZ38_9DELT
hypothetical Protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Displaying items 31-60 of 69 in total

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